| General Information: |
|
| Name(s) found: |
UTP5 /
YDR398W
[SGD]
|
| Description(s) found:
Found 27 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 643 amino acids |
Gene Ontology: |
|
| Cellular Component: |
small nucleolar ribonucleoprotein complex
[IPI ]
|
| Biological Process: |
maturation of SSU-rRNA
[IMP][IPI]
ribosome biogenesis [RCA ]
|
| Molecular Function: |
snoRNA binding
[IPI]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MDSPVLQSAY DPSGQYLCYV TVALDKQRVG VQPTQRATSS GVDTVWNENF LYLEDSKLKV 60
61 TCLKWVNLAS SDTVAIILGM NNGEIWLYSV LANEVTYKFT TGNSYEIKDI DLMGNQLWCI 120
121 DSSDAFYQFD LLQFKLLQHF RINNCVQLNK LTIVPAGDSV AQLLVASHSI SLIDIEEKKV 180
181 VMTFPGHVSP VSTLQVITNE FFISGAEGDR FLNVYDIHSG MTKCVLVAES DIKELSHSGQ 240
241 ADSIAVTTED GSLEIFVDPL VSSSTKKRGN KSKKSSKKIQ IVSKDGRKVP IYNAFINKDL 300
301 LNVSWLQNAT MPYFKNLQWR EIPNEYTVEI SLNWNNKNKS ADRDLHGKDL ASATNYVEGN 360
361 ARVTSGDNFK HVDDAIKSWE RELTSLEQEQ AKPPQANELL TETFGDKLES STVARISGKK 420
421 TNLKGSNLKT ATTTGTVTVI LSQALQSNDH SLLETVLNNR DERVIRDTIF RLKPALAVIL 480
481 LERLAERIAR QTHRQGPLNV WVKWCLIIHG GYLVSIPNLM STLSSLHSTL KRRSDLLPRL 540
541 LALDARLDCT INKFKTLNYE AGDIHSSEPV VEEDEDDVEY NEELDDAGLI EDGEESYGSE 600
601 EEEEGDSDNE EEQKHTSSKQ DGRLETEQSD GEEEAGYSDV EME |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
NAN1 POL5 UTP10 UTP15 UTP4 UTP5 UTP8 UTP9 |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
DRS1 GAR1 IFH1 NOP1 NPL3 NSR1 POP1 POP2 RAT1 RNT1 RRP3 SBP1 SNM1 SRD1 UTP10 UTP11 UTP13 UTP4 UTP5 UTP6 UTP7 UTP8 UTP9 YME2 |
| View Details | Krogan NJ, et al. (2006) |
|
GFD2 NAN1 POL5 UTP10 UTP15 UTP4 UTP5 UTP8 UTP9 |
| View Details | Ho Y, et al. (2002) |
|
ACC1 CPR6 FAA4 LIA1 OLA1 RNR2 RPT4 SEC53 SGD1 UTP5 YER138C |
| View Details | Qiu et al. (2008) |
|
BUD21 DBP3 DBP7 DIP2 ENP1 ERB1 GAR1 HCA4 IMP3 KRE33 MAK11 MAK5 MRD1 NAN1 NOC3 NOP1 NOP12 NOP13 NOP4 NOP8 NPL3 NSR1 NUG1 PUF6 PWP1 PWP2 RCL1 RNT1 RRB1 RRP1 RRP5 RRP9 SAS10 SBP1 SNU13 SOF1 SPB4 UTP10 UTP11 UTP13 UTP14 UTP15 UTP18 UTP20 UTP22 UTP4 UTP5 UTP6 UTP7 UTP8 UTP9 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Toshima J, et al (2006) | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
| View Run | #32 Asynchronous Prep-No Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #29 Asynchronous Prep5-TiO2 Flowthrough | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 2 | Unpublished Fields Lab Data | ||
| View Screen | 2 | Unpublished Fields Lab Data | ||
| View Screen | 2 | Unpublished Fields Lab Data | ||
| View Screen | 2 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..365] |  |
84.450636 | Tup1, C-terminal domain |
| 2 | View Details | [366..563] | |
3.42499 | View MSA. No confident structure predictions are available. |
| 3 | View Details | [564..643] | |
1.026992 | View MSA. No confident structure predictions are available. |
| 4 | View Details | [552..643] | |
N/A | No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.75 |
Source: Reynolds et al. (2008)