From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.530592192764] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
retrotransposon nucleocapsid | 4.3024E-4 | 2 | 131 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
transposition, RNA-mediated | 4.4352E-4 | 2 | 133 | 2 | 6292 |
transposition | 4.987E-4 | 2 | 141 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
RNA-directed DNA polymerase activity | 2.4511E-4 | 2 | 99 | 2 | 6292 |
DNA-directed DNA polymerase activity | 3.0291E-4 | 2 | 110 | 2 | 6292 |
DNA polymerase activity | 3.312E-4 | 2 | 115 | 2 | 6292 |
ribonuclease activity | 5.5711E-4 | 2 | 149 | 2 | 6292 |
nucleotidyltransferase activity | 7.0879E-4 | 2 | 168 | 2 | 6292 |
peptidase activity | 9.2646E-4 | 2 | 192 | 2 | 6292 |
nuclease activity | 9.9543E-4 | 2 | 199 | 2 | 6292 |
hydrolase activity, acting on ester bonds | 2.929E-3 | 2 | 341 | 2 | 6292 |
RNA binding | 3.3934E-3 | 2 | 367 | 2 | 6292 |
transferase activity, transferring phosphorus-containing groups | 4.4459E-3 | 2 | 420 | 2 | 6292 |
protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |