From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.18023784188] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
PAC10 |
|
|
|
YKE2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
prefoldin complex | 1.0611E-6 | 2 | 7 | 2 | 6292 |
cytosolic part | 3.7294E-4 | 2 | 122 | 2 | 6292 |
cytosol | 2.0305E-3 | 2 | 284 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
tubulin complex assembly | 7.579E-7 | 2 | 6 | 2 | 6292 |
cellular protein complex assembly | 7.2304E-5 | 2 | 54 | 2 | 6292 |
protein complex assembly | 6.0304E-4 | 2 | 155 | 2 | 6292 |
protein complex biogenesis | 6.0304E-4 | 2 | 155 | 2 | 6292 |
cellular macromolecular complex assembly | 8.3223E-4 | 2 | 182 | 2 | 6292 |
cellular macromolecular complex subunit organization | 1.6882E-3 | 2 | 259 | 2 | 6292 |
macromolecular complex assembly | 1.9877E-3 | 2 | 281 | 2 | 6292 |
macromolecular complex subunit organization | 3.2108E-3 | 2 | 357 | 2 | 6292 |
cellular component assembly | 3.7349E-3 | 2 | 385 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
tubulin binding | 9.6001E-6 | 2 | 20 | 2 | 6292 |
cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |