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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.10757632586]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of cyclin-dependent protein kinase activity 4.5979E-6 2 14 2 6292
regulation of kinase activity 1.6421E-5 2 26 2 6292
regulation of protein kinase activity 1.6421E-5 2 26 2 6292
regulation of transferase activity 1.6421E-5 2 26 2 6292
regulation of phosphorylation 2.3495E-5 2 31 2 6292
regulation of phosphorus metabolic process 3.552E-5 2 38 2 6292
regulation of phosphate metabolic process 3.552E-5 2 38 2 6292
regulation of catalytic activity 4.7798E-5 2 44 2 6292
regulation of molecular function 4.7798E-5 2 44 2 6292
regulation of cell cycle 4.3024E-4 2 131 2 6292
phosphorylation 8.0494E-4 2 179 2 6292
re-entry into mitotic cell cycle 9.5344E-4 2 3 1 6292
re-entry into mitotic cell cycle after pheromone arrest 9.5344E-4 2 3 1 6292
phosphorus metabolic process 1.3191E-3 2 229 2 6292
phosphate metabolic process 1.3191E-3 2 229 2 6292
S phase 3.1764E-3 2 10 1 6292
S phase of mitotic cell cycle 3.1764E-3 2 10 1 6292
adaptation of signaling pathway 4.4455E-3 2 14 1 6292
adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion 4.4455E-3 2 14 1 6292
cell cycle process 6.0534E-3 2 490 2 6292
cell cycle 6.95E-3 2 525 2 6292
regulation of cellular metabolic process 7.2445E-3 2 536 2 6292
regulation of metabolic process 7.5452E-3 2 547 2 6292
regulation of signaling pathway 8.8811E-3 2 28 1 6292
G2/M transition of mitotic cell cycle 9.1975E-3 2 29 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cyclin-dependent protein kinase regulator activity 1.6421E-5 2 26 2 6292
protein kinase regulator activity 5.2295E-5 2 46 2 6292
kinase regulator activity 5.9419E-5 2 49 2 6292
enzyme regulator activity 1.0773E-3 2 207 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle