From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.963062542915] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
polarisome | 1.9064E-3 | 2 | 6 | 1 | 6292 |
actin cap | 3.811E-3 | 2 | 12 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cell morphogenesis | 3.9158E-4 | 2 | 125 | 2 | 6292 |
cellular component morphogenesis | 4.7763E-4 | 2 | 138 | 2 | 6292 |
anatomical structure morphogenesis | 1.6621E-3 | 2 | 257 | 2 | 6292 |
anatomical structure development | 1.7012E-3 | 2 | 260 | 2 | 6292 |
cellular developmental process | 1.9175E-3 | 2 | 276 | 2 | 6292 |
reproduction | 2.7096E-3 | 2 | 328 | 2 | 6292 |
developmental process | 2.7595E-3 | 2 | 331 | 2 | 6292 |
Rho protein signal transduction | 6.3477E-3 | 2 | 20 | 1 | 6292 |
cell morphogenesis involved in conjugation with cellular fusion | 6.9813E-3 | 2 | 22 | 1 | 6292 |
cell morphogenesis involved in conjugation | 7.6148E-3 | 2 | 24 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cytoskeletal regulatory protein binding | 1.9064E-3 | 2 | 6 | 1 | 6292 |
phosphatidylinositol-3-phosphate binding | 6.0308E-3 | 2 | 19 | 1 | 6292 |
protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |