From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.708885069792] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cellular bud tip | 8.0641E-5 | 2 | 57 | 2 | 6292 |
cellular bud neck | 4.1715E-4 | 2 | 129 | 2 | 6292 |
cellular bud | 6.9196E-4 | 2 | 166 | 2 | 6292 |
site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
establishment of vesicle localization | 6.3568E-4 | 2 | 2 | 1 | 6292 |
vesicle targeting | 6.3568E-4 | 2 | 2 | 1 | 6292 |
actomyosin structure organization | 9.5344E-4 | 2 | 3 | 1 | 6292 |
cytokinesis, actomyosin contractile ring assembly | 9.5344E-4 | 2 | 3 | 1 | 6292 |
assembly of actomyosin apparatus involved in cell cycle cytokinesis | 9.5344E-4 | 2 | 3 | 1 | 6292 |
vesicle localization | 1.2712E-3 | 2 | 4 | 1 | 6292 |
cell morphogenesis involved in conjugation with cellular fusion | 6.9813E-3 | 2 | 22 | 1 | 6292 |
cell morphogenesis involved in conjugation | 7.6148E-3 | 2 | 24 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
myosin heavy chain binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
myosin II heavy chain binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
myosin V binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
myosin II binding | 6.3568E-4 | 2 | 2 | 1 | 6292 |
myosin binding | 1.5888E-3 | 2 | 5 | 1 | 6292 |
phosphatidylinositol-3-phosphate binding | 6.0308E-3 | 2 | 19 | 1 | 6292 |
protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |