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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: RPA135
Protein Desc: RNA polymerase I second largest subunit A135
Sequence Coverage: 56.9%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MSKVIKPPGQ ARTADFRTLE RESRFINPPK DKSAFPLLQE AVQPHIGSFN ALTEGPDGGL  60
   61  LNLGVKDIGE KVIFDGKPLN SEDEISNSGY LGNKLSVSVE QVSIAKPMSN DGVSSAVERK 120
  121  VYPSESRQRL TSYRGKLLLK LKWSVNNGEE NLFEVRDCGG LPVMLQSNRC HLNKMSPYEL 180
  181  VQHKEESDEI GGYFIVNGIE KLIRMLIVQR RNHPMAIIRP SFANRGASYS HYGIQIRSVR 240
  241  PDQTSQTNVL HYLNDGQVTF RFSWRKNEYL VPVVMILKAL CHTSDREIFD GIIGNDVKDS 300
  301  FLTDRLELLL RGFKKRYPHL QNRTQVLQYL GDKFRVVFQA SPDQSDLEVG QEVLDRIVLV 360
  361  HLGKDGSQDK FRMLLFMIRK LYSLVAGECS PDNPDATQHQ EVLLGGFLYG MILKEKIDEY 420
  421  LQNIIAQVRM DINRGMAINF KDKRYMSRVL MRVNENIGSK MQYFLSTGNL VSQSGLDLQQ 480
  481  VSGYTVVAEK INFYRFISHF RMVHRGSFFA QLKTTTVRKL LPESWGFLCP VHTPDGSPCG 540
  541  LLNHFAHKCR ISTQQSDVSR IPSILYSLGV APASHTFAAG PSLCCVQIDG KIIGWVSHEQ 600
  601  GKIIADTLRY WKVEGKTPGL PIDLEIGYVP PSTRGQYPGL YLFGGHSRML RPVRYLPLDK 660
  661  EDIVGPFEQV YMNIAVTPQE IQNNVHTHVE FTPTNILSIL ANLTPFSDFN QSPRNMYQCQ 720
  721  MGKQTMGTPG VALCHRSDNK LYRLQTGQTP IVKANLYDDY GMDNFPNGFN AVVAVISYTG 780
  781  YDMDDAMIIN KSADERGFGY GTMYKTEKVD LALNRNRGDP ITQHFGFGND EWPKEWLEKL 840
  841  DEDGLPYIGT YVEEGDPICA YFDDTLNKTK IKTYHSSEPA YIEEVNLIGD ESNKFQELQT 900
  901  VSIKYRIRRT PQIGDKFSSR HGQKGVCSRK WPTIDMPFSE TGIQPDIIIN PHAFPSRMTI 960
  961  GMFVESLAGK AGALHGIAQD STPWIFNEDD TPADYFGEQL AKAGYNYHGN EPMYSGATGE1020
 1021  ELRADIYVGV VYYQRLRHMV NDKFQVRSTG PVNSLTMQPV KGRKRHGGIR VGEMERDALI1080
 1081  GHGTSFLLQD RLLNSSDYTQ ASVCRECGSI LTTQQSVPRI GSISTVCCRR CSMRFEDAKK1140
 1141  LLTKSEDGEK IFIDDSQIWE DGQGNKFVGG NETTTVAIPF VLKYLDSELS AMGIRLRYNV1200
 1201  EPK

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 7.4419 0.5059 3492.05 10925.0 1 31.8 6 K.SAFPLLQEAVQPHIGSFNALTEGPDGGLLNLGVK.D
[No Spectrum] 3.8793 0.3735 3188.07 8073.9 2 21.7 1 F.PLLQEAVQPHIGSFNALTEGPDGGLLNLGVK.D
[No Spectrum] 4.5535 0.4406 2496.72 5767.6 1 56.8 2 K.VIFDGKPLNSEDEISNSGYLGNK.L
[No Spectrum] 4.6996 0.3854 2499.16 7252.8 1 36.4 1 K.VIFDGKPLNSEDEISNSGYLGNK.L
[No Spectrum] 4.5192 0.3299 2719.08 7566.5 1 28.0 1 K.LSVSVEQVSIAKPMSNDGVSSAVERK.V
[No Spectrum] 3.9183 0.4191 1935.15 8422.4 1 60.0 1 K.LKWSVNNGEENLFEVR.D
[No Spectrum] 3.5539 0.2362 3365.16 8156.5 1 24.1 1 K.LKWSVNNGEENLFEVRDCGGLPVMLQSNR.C
[No Spectrum] 3.6402 0.3621 1693.77 8432.4 1 61.5 1 K.WSVNNGEENLFEVR.D
[No Spectrum] 3.9103 0.2788 3124.09 8716.4 1 27.9 1 K.WSVNNGEENLFEVRDCGGLPVMLQSNR.C
[No Spectrum] 4.1679 0.3107 1448.67 4015.2 1 75.0 1 R.DCGGLPVMLQSNR.C
[No Spectrum] 3.2128 0.21 2100.03 7079.4 1 47.1 1 R.DCGGLPVMLQSNRCHLNK.M
[No Spectrum] 6.065 0.3954 3113.84 6719.2 1 38.5 5 K.MSPYELVQHKEESDEIGGYFIVNGIEK.L
[No Spectrum] 3.1211 0.4134 1351.66 5860.3 1 68.2 1 R.GASYSHYGIQIR.S
[No Spectrum] 3.9208 0.4272 2776.36 6114.9 1 39.1 1 R.SVRPDQTSQTNVLHYLNDGQVTFR.F
[No Spectrum] 5.2526 0.4323 2779.15 7803.6 1 33.7 3 R.SVRPDQTSQTNVLHYLNDGQVTFR.F
[No Spectrum] 4.3987 0.3666 1546.41 6589.5 1 79.2 1 R.KNEYLVPVVMILK.A
[No Spectrum] 2.7334 0.2298 1164.59 10164.3 2 66.7 1 R.TQVLQYLGDK.F
[No Spectrum] 3.3583 0.1913 1165.7 4425.0 2 83.3 1 R.TQVLQYLGDK.F
[No Spectrum] 3.4977 0.3673 1469.36 8070.6 1 72.7 1 R.TQVLQYLGDKFR.V
[No Spectrum] 7.1989 0.6043 3230.89 8413.4 1 35.8 2 R.IPSILYSLGVAPASHTFAAGPSLCCVQIDGK.I
[No Spectrum] 3.3526 0.3033 2344.99 9270.6 1 38.6 1 L.GVAPASHTFAAGPSLCCVQIDGK.I
[No Spectrum] 3.1128 0.2027 1256.04 7036.5 1 80.0 1 K.IIGWVSHEQGK.I
[No Spectrum] 5.3021 0.5629 2038.56 9082.9 1 67.6 1 K.IIGWVSHEQGKIIADTLR.Y
[No Spectrum] 4.0563 0.3364 2038.89 4372.2 1 41.2 1 K.IIGWVSHEQGKIIADTLR.Y
[No Spectrum] 3.6471 0.2604 1280.79 5655.5 1 83.3 1 K.IIADTLRYWK.V
[No Spectrum] 3.6009 0.2773 1692.98 7741.8 1 53.8 1 K.IIADTLRYWKVEGK.T
[No Spectrum] 4.7329 0.4911 1926.87 6159.7 1 55.9 5 K.TPGLPIDLEIGYVPPSTR.G
[No Spectrum] 4.1223 0.3704 3459.3 4634.7 1 26.6 2 K.TPGLPIDLEIGYVPPSTRGQYPGLYLFGGHSR.M
[No Spectrum] 4.8748 0.5393 1825.58 6082.3 1 68.8 1 T.PGLPIDLEIGYVPPSTR.G
[No Spectrum] 3.6001 0.4662 1553.41 7192.7 1 65.4 3 R.GQYPGLYLFGGHSR.M
[No Spectrum] 3.5126 0.4407 1368.26 7191.0 1 86.4 1 Q.YPGLYLFGGHSR.M
[No Spectrum] 3.1195 0.4105 1204.63 5461.3 1 85.0 1 Y.PGLYLFGGHSR.M
[No Spectrum] 4.0425 0.3602 2569.61 6629.1 1 38.1 1 R.NMYQCQMGKQTMGTPGVALCHR.S
[No Spectrum] 3.4299 0.3391 2570.19 9978.1 1 35.7 1 R.NMYQCQMGKQTMGTPGVALCHR.S
[No Spectrum] 3.2402 0.2742 1428.58 5241.6 1 66.7 1 K.QTMGTPGVALCHR.S
[No Spectrum] 3.2497 0.2371 1962.13 6819.2 1 59.4 1 R.SDNKLYRLQTGQTPIVK.A
[No Spectrum] 3.5621 0.3464 1517.98 7815.2 1 70.8 1 K.LYRLQTGQTPIVK.A
[No Spectrum] 4.3524 0.2767 1518.89 9182.0 1 54.2 1 K.LYRLQTGQTPIVK.A
[No Spectrum] 3.8316 0.4235 1582.9 7019.1 1 57.7 1 K.SADERGFGYGTMYK.T
[No Spectrum] 3.9087 0.4275 1940.68 8124.4 1 62.5 1 K.SADERGFGYGTMYKTEK.V
[No Spectrum] 5.0885 0.2845 2724.76 9440.6 1 34.8 3 K.SADERGFGYGTMYKTEKVDLALNR.N
[No Spectrum] 4.5116 0.4003 2165.22 6976.3 1 36.1 1 R.GFGYGTMYKTEKVDLALNR.N
[No Spectrum] 3.5248 0.2347 1159.74 5682.8 2 83.3 1 K.TEKVDLALNR.N
[No Spectrum] 4.091 0.4874 1805.85 7411.7 1 50.0 2 R.NRGDPITQHFGFGNDE.W
[No Spectrum] 4.0704 0.4367 2215.81 5883.3 1 66.7 1 R.NRGDPITQHFGFGNDEWPK.E
[No Spectrum] 4.2815 0.3457 2218.32 8591.8 1 40.3 1 R.NRGDPITQHFGFGNDEWPK.E
[No Spectrum] 4.2734 0.4235 2348.13 9069.9 1 36.8 2 R.NRGDPITQHFGFGNDEWPKE.W
[No Spectrum] 4.5689 0.185 4011.74 8362.7 1 21.2 1 K.EWLEKLDEDGLPYIGTYVEEGDPICAYFDDTLNK.T
[No Spectrum] 5.7989 0.5386 2495.76 6367.4 1 61.9 1 K.TYHSSEPAYIEEVNLIGDESNK.F
[No Spectrum] 4.8156 0.339 2496.8 6724.9 1 36.9 1 K.TYHSSEPAYIEEVNLIGDESNK.F
[No Spectrum] 5.5872 0.3764 3669.71 5795.6 1 33.1 6 K.TYHSSEPAYIEEVNLIGDESNKFQELQTVSIK.Y
[No Spectrum] 3.1166 0.1437 1193.77 4606.6 2 88.9 1 K.FQELQTVSIK.Y
[No Spectrum] 6.7549 0.4291 3210.46 7882.9 1 36.1 2 R.KWPTIDMPFSETGIQPDIIINPHAFPSR.M
[No Spectrum] 6.0898 0.43 3080.64 6919.7 1 36.5 1 K.WPTIDMPFSETGIQPDIIINPHAFPSR.M
[No Spectrum] 4.3583 0.373 1384.68 6511.1 1 83.3 3 R.MTIGMFVESLAGK.A
[No Spectrum] 5.3511 0.4402 3479.52 7151.2 1 28.2 2 K.AGALHGIAQDSTPWIFNEDDTPADYFGEQLAK.A
[No Spectrum] 5.9266 0.5491 2360.22 6383.9 1 65.8 2 T.PWIFNEDDTPADYFGEQLAK.A
[No Spectrum] 4.0856 0.3366 3745.75 7040.1 1 22.7 1 K.AGYNYHGNEPMYSGATGEELRADIYVGVVYYQR.L
[No Spectrum] 3.882 0.3754 1461.19 8397.6 1 69.2 1 R.STGPVNSLTMQPVK.G
[No Spectrum] 3.4818 0.3435 1672.73 8667.1 1 46.7 1 R.STGPVNSLTMQPVKGR.K
[No Spectrum] 3.436 0.26 1803.98 7942.7 1 50.0 2 R.STGPVNSLTMQPVKGRK.R
[No Spectrum] 3.7512 0.4292 2867.95 8709.9 1 27.0 4 R.HGGIRVGEMERDALIGHGTSFLLQDR.L
[No Spectrum] 4.884 0.394 2346.86 8272.6 1 36.2 3 R.VGEMERDALIGHGTSFLLQDR.L
[No Spectrum] 4.474 0.4915 1644.63 7782.4 1 78.6 1 R.DALIGHGTSFLLQDR.L
[No Spectrum] 4.6765 0.5837 1614.65 10045.3 1 80.8 1 R.LLNSSDYTQASVCR.E
[No Spectrum] 5.1601 0.5115 3171.72 9440.8 1 32.4 7 R.LLNSSDYTQASVCRECGSILTTQQSVPR.I
[No Spectrum] 4.2427 0.4423 1576.63 8292.4 1 73.1 1 R.ECGSILTTQQSVPR.I
[No Spectrum] 3.3449 0.4166 1153.95 5413.7 1 88.9 1 R.IGSISTVCCR.R
[No Spectrum] 6.9699 0.3304 3094.8 9632.6 1 37.5 1 K.KLLTKSEDGEKIFIDDSQIWEDGQGNK.F
[No Spectrum] 6.1869 0.4024 2966.88 7386.3 1 37.0 2 K.LLTKSEDGEKIFIDDSQIWEDGQGNK.F
[No Spectrum] 3.5454 0.2281 1598.04 6741.1 2 65.4 1 K.SEDGEKIFIDDSQI.W
[No Spectrum] 4.9309 0.4013 2510.89 8776.6 1 47.6 3 K.SEDGEKIFIDDSQIWEDGQGNK.F
[No Spectrum] 5.7853 0.374 2511.58 6583.4 1 39.3 2 K.SEDGEKIFIDDSQIWEDGQGNK.F
[No Spectrum] 5.4017 0.4521 1865.5 9227.5 1 76.7 7 K.IFIDDSQIWEDGQGNK.F
[No Spectrum] 4.7175 0.493 1794.5 6944.0 1 65.6 5 K.FVGGNETTTVAIPFVLK.Y
[No Spectrum] 5.2259 0.4131 3131.46 9151.2 1 33.0 1 K.FVGGNETTTVAIPFVLKYLDSELSAMGIR.L
[No Spectrum] 4.6296 0.4673 1356.0 7979.5 1 86.4 1 K.YLDSELSAMGIR.L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle