YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|13096728, gi\|...
Organism:	Homo sapiens
Length:	162 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13096728, gi|....

Description	E-value	Query Range	Subject Range
gi\|114647540 - gi\|114647540\|ref\|XP_001150587.1\| PREDICTED: similar to Smac [Pan troglodytes]	278.0	[0..1]	[162..185]
gi\|50756407 - gi\|50756407\|ref\|XP_415152.1\| PREDICTED: similar to Diablo homolog, mitochondrial precursor (Second m...	258.0	[0..1]	[161..208]
gi\|10437144 - gi\|10437144\|dbj\|BAB14994.1\| unnamed protein product [Homo sapiens]	254.0	[0..1]	[162..56]
gi\|109099086 - gi\|109099086\|ref\|XP_001097400.1\| PREDICTED: diablo homolog (Drosophila) isoform 5 [Macaca mulatta]	254.0	[0..1]	[162..56]
DBLOH_PONPY - Diablo homolog, mitochondrial precursor - Pongo pygmaeus (Orangutan) DBLOH_PONAB - Diablo homolog, mitochondrial OS=Pongo abelii GN=DIABLO PE=2 SV=1	254.0	[0..1]	[162..56]
gi\|84708706, gi\|... - gi\|84708706\|gb\|AAI11128.1\| Diablo homolog (Drosophila) [Bos taurus], gi\|76638944\|ref\|XP_872126.1\| PR...	249.0	[0..1]	[162..54]
DBLOH_MOUSE, DBO... - (Q9JIQ3) Diablo homolog, mitochondrial precursor (Second mitochondria-derived activator of caspase) ...	248.0	[0..1]	[161..54]
gi\|119331166, gi... - gi\|73994503\|ref\|XP_849730.1\| PREDICTED: similar to Diablo homolog, mitochondrial precursor (Second m...	248.0	[0..1]	[162..54]

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Predicted Domain #1

Region A:
Residues: [1-162]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVPIAQKSEP HSLSSEALMR RAVSLVTDST STDLSQTTYA LIEAITEYTK AVYTLTSLYR  60
   61 QYTSLLGKMN SEEEDEVWQV IIGARAEMTS KHQEYLKLET TWMTAVGLSE MAAEAAYQTG 120
  121 ADQASITARN HIQLVKLQVE EVHQLSRKAE TKLAEAQIEE LR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	60.522879
Match:	1fewA
Description:	Smac/diablo
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits