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View Structure Prediction Details

Protein: gi|238479300, gi...
Organism: Arabidopsis thaliana
Length: 425 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|238479300, gi....

Description E-value Query
Range
Subject
Range
gi|42567218, gi|... - gi|42567218|ref|NP_194584.3| RabGAP/TBC domain-containing protein [Arabidopsis thaliana], gi|1199358...
262.0 [0..1] [423..1]

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Predicted Domain #1
Region A:
Residues: [1-425]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCCGFMWKS GGEDLQGFYP VRPECQPDVP RTRFKSRAGK TLSARRWHAA FTEDGHLDME  60
   61 KVLRRIQRGG IHPSIKGAVW EFLLGCYDPD STFEERNILR NRRREQYGAW KEECKKMVPV 120
  121 IGSGKYVTMA VVQENGNPID ESSVENQGWI VKNTVTDERV LQWMLSLHQI GLDVARTDRY 180
  181 LCFYENDRNQ SKLWDVLAIY TWLNLDIGYV QGMNDICSPM IILFDDEGDA FWCFERAMRR 240
  241 LRENFRATAT SMGVQTQLGV LSQVIKTVDP RLHQHLEDLD GGEYLFAIRM LMVLFRREFS 300
  301 FLDALYLWEL MWAMEYNPTM FATYEELENR NNAASDPKLL KRYGKFERKY INSGQNEQHR 360
  361 NTLAVFVVAS VLQTKNKRLL KEAKGLDDVV QILGDIAGNL DAKKACKEAL KIHEKFLKKA 420
  421 NSNKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.0
Match: 2qq8A
Description: No description for 2qq8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle