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View Structure Prediction Details

Protein: gi|30684920
Organism: Arabidopsis thaliana
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30684920.

Description E-value Query
Range
Subject
Range
GLO2N_ARATH - Hydroxyacylglutathione hydrolase 2, mitochondrial OS=Arabidopsis thaliana GN=At2g31350 PE=1 SV=1
320.0 [0..1] [323..1]

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Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTISKASSA TSFFRCSRLS SQPCVRQLNI RKSLVCRVMK LVSSPLRTLR GAGKSIRVSK  60
   61 FCSVSNVSSL QIELVPCLKD NYAYILHDED TGTVGVVDPS EAEPIIDSLK RSGRNLTYIL 120
  121 NTHHHYDHTG GNLELKDRYG AKVIGSAMDK DRIPGIDMAL KDGDKWMFAG HEVHVMDTPG 180
  181 HTKGHISLYF PGSRAIFTGD TMFSLSCGKL FEGTPKQMLA SLQKITSLPD DTSIYCGHEY 240
  241 TLSNSKFALS LEPNNEVLQS YAAHVAELRS KKLPTIPTTV KMEKACNPFL RSSNTDIRRA 300
  301 LRIPEAADEA EALGIIRKAK DDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.522879
Match: 1xm8A
Description: X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydroxyacylglutathione hydrolase activity 3.53012507604564 bayes_pls_golite062009
catalytic activity 0.941400907161877 bayes_pls_golite062009
binding 0.900972948435178 bayes_pls_golite062009
thiolester hydrolase activity 0.802604883362264 bayes_pls_golite062009
hydrolase activity 0.021392930321391 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle