| Protein: | gi|42571017 |
| Organism: | Arabidopsis thaliana |
| Length: | 410 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571017.
| Description | E-value | Query Range |
Subject Range |
|
|
310.0 | [0..1] | [410..1] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MLLNISSSPI SHRNPHFLSN FNNPISYFPR RSKTHLSKSH FFPKFTPLSN QSLKNRVLFG 60
61 NKRYPDGERF DFRSRAISGI DLGSFESVLE AIAVLTTIIV VHESGHFLAA SLQGIHVSKF 120
121 AIGF
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [125-410] |
1 11 21 31 41 51
| | | | | |
1 GPILAKFDYN NVEYSLRAFP LGGFVGFPDN DPDSEIPIDD ENLLKNRPTL DRSIVVSAGI 60
61 IANVIFAYAI IFVQVLSVGL PVQEAFPGVL VPEVKTFSAA SRDGLLSGDV ILAVDGTELS 120
121 KTGPDAVSKI VDIVKRNPKS NVVFRIERGG EDFDIRVTPD KNFDGTGKIG VQLSPNVRIT 180
181 KTASKVAGPV AIIAVGAEVA RSNIDGLYQF AALLNINLAV INLLPLPALD GGTLALILLE 240
241 AVRGGKKLPV EVEQGIMSSG IMLVIFLGLF LIVKDTLSLD FIKEML
|
| Detection Method: | |
| Confidence: | 30.221849 |
| Match: | 1ky9A |
| Description: | Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.566291652083235 | bayes_pls_golite062009 |
| protein binding | 0.52823753548825 | bayes_pls_golite062009 |
