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View Structure Prediction Details

Protein: gi|30678579
Organism: Arabidopsis thaliana
Length: 333 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30678579.

Description E-value Query
Range
Subject
Range
gi|21593435, gi|... - gi|21593435|gb|AAM65402.1| putative plant adhesion molecule [Arabidopsis thaliana], gi|18396196|ref|...
297.0 [0..1] [333..1]

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Predicted Domain #1
Region A:
Residues: [1-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKRTENGS ESGPATSHVP VDRFGFLKQE HANSPERFSK SKTTSSTDHD REERKVRKWR  60
   61 KMIGVGGSDW KHYVRRKPNV VRRRIRKGIP DCLRGLVWQL ISGSRDLLLM NPGVYEQLVI 120
  121 YETSASELDI IRDISRTFPS HVFFQKRHGP GQRSLYNVLK AYSVYDRDVG YVQGMGFIAG 180
  181 LLLLYMSEED AFWLLVALLK GAVHAPMEGL YHAGLPLVQQ YLFQLESLVK ELIPKLGEHF 240
  241 TQEMINPSMY ASQWFITVFS YSFPFPLALR IWDVFLSEVK LPFEKLIHAL KTFPEDAMNP 300
  301 DTLLPLAYSI KVSKRLEELT LEYQKTNAKP VQP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.30103
Match: 2qq8A
Description: No description for 2qq8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle