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View Structure Prediction Details

Protein: FBW1_ARATH
Organism: Arabidopsis thaliana
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBW1_ARATH.

Description E-value Query
Range
Subject
Range
gi|9294688 - gi|9294688|dbj|BAB03054.1| unnamed protein product [Arabidopsis thaliana]
217.0 [0..28] [410..1]

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Predicted Domain #1
Region A:
Residues: [1-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWFQHVKLY IASCINLFTK IQKPYLSMAM DSKECSLLPF ELFEEILCRV PTKSLLRLKL  60
   61 TCKRWLALFN DKRFIYKHLA LVREHIIRTN QMVKIINPVV GACSSFSLPN KFQVKGEIYT 120
  121 MVPCDGLLLC IFETGSMAVW NPCLNQVRWI FLLNPSFRGC SCYGIGYDGL SRDSYKILRF 180
  181 VNGVFTKNEY ANTGSYKPEV DIYELKSNSW KTFKVSLDWH VVLRCKGLSL KGNMYWIAKW 240
  241 NRKPDIFIQS FNFSTETFEP LCSLPVRYDV HNVVALSAFK GDNLSLLHQS KETSKIDVWV 300
  301 TNKVK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.30103
Match: 2ovpB
Description: No description for 2ovpB was found.

Predicted Domain #2
Region A:
Residues: [306-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGVSILWTKL FSVTRPDLPV LLAFENLSYP VHFIDKNNRI VVCCEEVLAD KRNVAVNIYV  60
   61 IGEDEIKSQD EIEQHQLGFS WPFISGYTYL PSLVPVPSSE DNTPE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle