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View Structure Prediction Details

Protein: gi|56121918, gi|...
Organism: Arabidopsis thaliana
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|56121918, gi|....

Description E-value Query
Range
Subject
Range
gi|67853792, gi|... - gi|67924366|ref|ZP_00517797.1| surface antigen (D15):Surface antigen variable number [Crocosphaera w...
250.0 [0..6] [356..491]

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Predicted Domain #1
Region A:
Residues: [1-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK  60
   61 LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE IGVHGTPVDN FSRSGSGGVN 120
  121 LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV 180
  181 LKQESRFAKA TDQGLSHFSM QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG 240
  241 SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD 300
  301 LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS 360
  361 ST

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Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 2qdzA
Description: No description for 2qdzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle