| Protein: | gi|42566965 |
| Organism: | Arabidopsis thaliana |
| Length: | 859 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42566965.
| Description | E-value | Query Range |
Subject Range |
|
|
819.0 | [0..1] | [856..1] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MATLKPSFTV SPPNSNPIRF GSFPPQCFLR VPKPRRLILP RFRKTTGGGG GLIRCELPDF 60
61 HLSATATTVS GVSTVNLVDQ VQIPKG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [87-554] |
1 11 21 31 41 51
| | | | | |
1 EMWSVHKFGG TCVGNSQRIR NVAEVIINDN SERKLVVVSA MSKVTDMMYD LIRKAQSRDD 60
61 SYLSALEAVL EKHRLTARDL LDGDDLASFL SHLHNDISNL KAMLRAIYIA GHASESFSDF 120
121 VAGHGELWSA QMLSYVVRKT GLECKWMDTR DVLIVNPTSS NQVDPDFGES EKRLDKWFSL 180
181 NPSKIIIATG FIASTPQNIP TTLKRDGSDF SAAIMGALLR ARQVTIWTDV DGVYSADPRK 240
241 VNEAVILQTL SYQEAWEMSY FGANVLHPRT IIPVMRYNIP IVIRNIFNLS APGTIICQPP 300
301 EDDYDLKLTT PVKGFATIDN LALINVEGTG MAGVPGTASD IFGCVKDVGA NVIMISQASS 360
361 EHSVCFAVPE KEVNAVSEAL RSRFSEALQA GRLSQIEVIP NCSILAAVGQ KMASTPGVSC 420
421 TLFSALAKAN INVRAISQGC SEYNVTVVIK REDSVKALRA VHSRFFLS
|
| Detection Method: | |
| Confidence: | 97.522879 |
| Match: | 2hmfA |
| Description: | No description for 2hmfA was found. |
| Term | Confidence | Notes |
| acetolactate synthase activity | 3.48670706716817 | bayes_pls_golite062009 |
| aspartate kinase activity | 3.23731032633773 | bayes_pls_golite062009 |
| kinase activity | 2.6815187488202 | bayes_pls_golite062009 |
| phosphotransferase activity, carboxyl group as acceptor | 2.65970393362911 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.63366715780289 | bayes_pls_golite062009 |
| amino acid kinase activity | 2.38310367076654 | bayes_pls_golite062009 |
| transferase activity, transferring aldehyde or ketonic groups | 2.27460110663386 | bayes_pls_golite062009 |
| acetylglutamate kinase activity | 1.28891782911186 | bayes_pls_golite062009 |
| catalytic activity | 0.645256181736122 | bayes_pls_golite062009 |
| transferase activity | 0.576589833246962 | bayes_pls_golite062009 |
| binding | 0.532494654284107 | bayes_pls_golite062009 |
| glutamate 5-kinase activity | 0.416864856459166 | bayes_pls_golite062009 |
| protein binding | 0.066675161728882 | bayes_pls_golite062009 |
|
Region A: Residues: [555-859] |
1 11 21 31 41 51
| | | | | |
1 RTTLAMGIVG PGLIGATLLD QLRDQAAVLK QEFNIDLRVL GITGSKKMLL SDIGIDLSRW 60
61 RELLNEKGTE ADLDKFTQQV HGNHFIPNSV VVDCTADSAI ASRYYDWLRK GIHVITPNKK 120
121 ANSGPLDQYL KLRDLQRKSY THYFYEATVG AGLPIISTLR GLLETGDKIL RIEGICSGTL 180
181 SYLFNNFVGD RSFSEVVTEA KNAGFTEPDP RDDLSGTDVA RKVIILARES GLKLDLADLP 240
241 IRSLVPEPLK GCTSVEEFME KLPQYDGDLA KERLDAENSG EVRLFTTNVF PFDQCDHILT 300
301 IYICM
|
| Detection Method: | |
| Confidence: | 66.221849 |
| Match: | 1q7gA |
| Description: | Homoserine Dehydrogenase in complex with suicide inhibitor complex NAD-5-hydroxy-4-Oxonorvaline |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity | 2.60548927745815 | bayes_pls_golite062009 |
| catalytic activity | 2.54843319568228 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors | 1.54909195188343 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 0.841370849960815 | bayes_pls_golite062009 |
| phosphoglycerate dehydrogenase activity | 0.639509916626856 | bayes_pls_golite062009 |
| saccharopine dehydrogenase activity | 0.495113665163626 | bayes_pls_golite062009 |
| N-acetyl-gamma-glutamyl-phosphate reductase activity | 0.0651785123513661 | bayes_pls_golite062009 |
| binding | 0.0273599514394109 | bayes_pls_golite062009 |
