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View Structure Prediction Details

Protein: gi|186516803, gi...
Organism: Arabidopsis thaliana
Length: 672 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|186516803, gi....

Description E-value Query
Range
Subject
Range
gi|42569121 - gi|42569121|ref|NP_179401.2| unknown protein [Arabidopsis thaliana]
750.0 [0..1] [672..1]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEATSNLTP TQRYAAGALF AIALNQAQIN QTQPLGTPAA EDDDGGDEER RSNCSSGDSV  60
   61 SDDPSLWVHE TSGLLRPVFR CLEIDSPAWL GLEQTACSSP AKHHIGAFTR LLSEEANDAS 120
  121 AEMVEQEMAL AKAADAMVHS IQCSVSIDAK KEKHQEYENE CREKYAVPEV KSKDVDLDKE 180
  181 KDKKEAAESA AREGLEAGVV IIDGSHKPEV LENEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [216-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVEEVTLLSH QRKINVLYEL LSACLSDKHH EDKKCKRCRK GYDARHRVAL RLLATWFNIE  60
   61 WIKVEAIETM VACSAMAIQK SAEMKGEDNL TPTTSWAKWK RGGIIGAAAI TGGTLMAITG 120
  121 GLAAPAIAAG FGALAPTLGT IIPVIGAGGF AAAASAAGTV AGSVAVAASF GAAGAGLTGT 180
  181 KMARRIGDLD EFEFKAIGEN HNQGRLAVEV LVAGVVF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [433-672]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEEDFVKPWE GLTSNLERYT LQWESKNLIL VSTAIQDWLT SRLAMELMKQ GAMHTVLASL  60
   61 LMALAWPATI LVAADFIDSK WSIAIDRSDK AGRLLAEVLQ KGLQGNRPIT LVGFSLGARV 120
  121 IFKCLQALAE TEQNAELVER VVLLGAPISI NSENWRDVRK MVAGRFINVY ATNDWTLGIA 180
  181 FRASLISQGL AGIQPICIPG IENVDVTDMV EGHSSYLWKT QQILERLEID TYYPVFRDTL 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle