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View Structure Prediction Details

Protein: D2HDH_ARATH
Organism: Arabidopsis thaliana
Length: 559 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for D2HDH_ARATH.

Description E-value Query
Range
Subject
Range
gi|7270588, gi|4... - gi|7270588|emb|CAB80306.1| actin interacting protein [Arabidopsis thaliana], gi|4006920|emb|CAB16815...
440.0 [0..37] [559..5]

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Predicted Domain #1
Region A:
Residues: [1-559]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMQKLRRSG EFIRFGCKSL ISSRPNKDSV SRSVSGFVNH YKSKGKLFEL SDGNYKTELH  60
   61 HPCISRNVGM LLQQYKCFGS SAASLIQRNP LFSSLDSKDV SYFKEILGEK NVVEDKERLE 120
  121 TANTDWMHKY KGSSKLMLLP KNTQEVSQIL EYCDSRRLAV VPQGGNTGLV GGSVPVFDEV 180
  181 IVNVGLMNKI LSFDEVSGVL VCEAGCILEN LATFLDTKGF IMPLDLGAKG SCHIGGNVST 240
  241 NAGGLRLIRY GSLHGTVLGL EAVTANGNVL DMLGTLRKDN TGYDLKHLFI GSEGSLGIVT 300
  301 KVSILTQPKL SSVNLAFIAC KDYLSCQKLL VEAKRNLGEI LSAFEFLDNN SMDLVLNHLD 360
  361 GVRNPVSSSE NFYILIETTG SDETNDREKL EAFLLKSLEK GLVSDGVIAQ DINQASSFWR 420
  421 IREGITEALQ KAGAVYKYDL SLPVEEIYNI VNDLRGRLGD LANVMGYGHL GDGNLHLNIS 480
  481 AAEYNDKLLG LIEPYVYEWT SKHRGSISAE HGLGVMKANE IFYSKSPETV ALMASIKKLL 540
  541 DPKGILNPYK VLPHSLFSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.154902
Match: 2uuuA
Description: No description for 2uuuA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle