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View Structure Prediction Details

Protein: PP385_ARATH
Organism: Arabidopsis thaliana
Length: 548 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP385_ARATH.

Description E-value Query
Range
Subject
Range
gi|54695180 - gi|54695180|dbj|BAD67155.1| PPR986-12 [Physcomitrella patens]
528.0 [0..3] [546..303]

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Predicted Domain #1
Region A:
Residues: [1-548]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRRQTNDRT TNRRRPKLWQ NCKNIRTLKQ IHASMVVNGL MSNLSVVGEL IYSASLSVPG  60
   61 ALKYAHKLFD EIPKPDVSIC NHVLRGSAQS MKPEKTVSLY TEMEKRGVSP DRYTFTFVLK 120
  121 ACSKLEWRSN GFAFHGKVVR HGFVLNEYVK NALILFHANC GDLGIASELF DDSAKAHKVA 180
  181 WSSMTSGYAK RGKIDEAMRL FDEMPYKDQV AWNVMITGCL KCKEMDSARE LFDRFTEKDV 240
  241 VTWNAMISGY VNCGYPKEAL GIFKEMRDAG EHPDVVTILS LLSACAVLGD LETGKRLHIY 300
  301 ILETASVSSS IYVGTPIWNA LIDMYAKCGS IDRAIEVFRG VKDRDLSTWN TLIVGLALHH 360
  361 AEGSIEMFEE MQRLKVWPNE VTFIGVILAC SHSGRVDEGR KYFSLMRDMY NIEPNIKHYG 420
  421 CMVDMLGRAG QLEEAFMFVE SMKIEPNAIV WRTLLGACKI YGNVELGKYA NEKLLSMRKD 480
  481 ESGDYVLLSN IYASTGQWDG VQKVRKMFDD TRVKKPTGVS LIEEDDDKLM MRYLLSSEPE 540
  541 SRSRGRIN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.522879
Match: 2gw1A
Description: No description for 2gw1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle