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View Structure Prediction Details

Protein: FRS10_ARATH
Organism: Arabidopsis thaliana
Length: 685 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRS10_ARATH.

Description E-value Query
Range
Subject
Range
gi|9502168, gi|7... - gi|9502168|gb|AAF88018.1| contains simlarity to Arabidopsis thaliana far-red impaired response prote...
431.0 [0..1] [685..1]

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Predicted Domain #1
Region A:
Residues: [1-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKPLNNIW IRRQQCPCGD WKCYIRLEED ESTITKSEIE STPTPTSQYD TVFTPYVGQI  60
   61 FTTDDEAFEY YSTFARKSGF SIRKARSTES QNLGVYRRDF VCYRSGFNQP RKKANVEHPR 120
  121 ERKSVRCGCD GKLYLTKEVV DGVSHWYVSQ FSNVHNHELL EDDQVRLLPA YRKIQQSDQE 180
  181 RILLLSK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [188-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGFPVNRIVK LLELEKGVVS GQLPFIEKDV RNFVRACKKS VQENDAFMTE KRESDTLELL  60
   61 ECCKGLAERD MDFVYDCTSD ENQKVENIAW AYGDSVRGYS LFGDVVVFDT SYRSVPYGLL 120
  121 LGVFFGIDNN GKAMLLGCVL LQDESCRSFT WALQTFVRFM RGRHPQTILT DIDTGLKDAI 180
  181 GREMPNTNHV VFMSHIVSKL ASWFSQTL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [396-514]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSHYEEFRAG FDMLCRAGNV DEFEQQWDLL VTRFGLVPDR HAALLYSCRA SWLPCCIREH  60
   61 FVAQTMTSEF NLSIDSFLKR VVDGATCMQL LLEESALQVS AAASLAKQIL PRFTYPSLK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [515-685]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TCMPMEDHAR GILTPYAFSV LQNEMVLSVQ YAVAEMANGP FIVHHYKKME GECCVIWNPE  60
   61 NEEIQCSCKE FEHSGILCRH TLRVLTVKNC FHIPEQYFLL RWRQESPHVA TENQNGQGIG 120
  121 DDSAQTFHSL TETLLTESMI SKDRLDYANQ ELSLLIDRVR NTAPANCLYQ P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle