| Protein: | PUB21_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 435 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB21_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
180.0 | [0..1] | [434..32] |
|
Region A: Residues: [1-435] |
1 11 21 31 41 51
| | | | | |
1 MGFLWRTRSN EKKITPVLSW PESEPESEIT IPPEFQCPIS IDLMKDPVII STGITYDRVS 60
61 IETWINSGNK TCPVTNTVLT TFDQIPNHTI RKMIQGWCVE KGSPLIQRIP TPRVPLMPCE 120
121 VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD 180
181 EKLTFMLNEI LSLLTWMFPI GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL 240
241 SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV 300
301 SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS 360
361 MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET KEKATELLKM MNTQMKLMSD 420
421 CVDSLKEFKY IKKPF
|
| Detection Method: |  |
| Confidence: | 34.69897 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.373576425899935 | bayes_pls_golite062009 |
