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View Structure Prediction Details

Protein: CLE3_ARATH
Organism: Arabidopsis thaliana
Length: 83 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLE3_ARATH.

Description E-value Query
Range
Subject
Range
CLE4_ARATH - CLAVATA3/ESR (CLE)-related protein 4 OS=Arabidopsis thaliana GN=CLE4 PE=2 SV=1
134.0 [0..1] [83..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLKLWVCL VLLLVLELTS VHECRPLVAE ERFSGSSRLK KIRRELFERL KEMKGRSEGE  60
   61 ETILGNTLDS KRLSPGGPDP RHH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.526 a.4.5 "Winged helix" DNA-binding domain
View Download 0.507 a.4.5 "Winged helix" DNA-binding domain
View Download 0.465 a.4.5 "Winged helix" DNA-binding domain
View Download 0.432 a.55.1 IHF-like DNA-binding proteins
View Download 0.420 a.28.1 ACP-like


YRC Informatics Platform - Version 3.0
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