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View Structure Prediction Details

Protein: TPK1_ARATH
Organism: Arabidopsis thaliana
Length: 267 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPK1_ARATH.

Description E-value Query
Range
Subject
Range
TPK2_ARATH - Thiamine pyrophosphokinase 2 OS=Arabidopsis thaliana GN=TPK2 PE=2 SV=1
343.0 [0..1] [267..2]

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Predicted Domain #1
Region A:
Residues: [1-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAMDVMIHS SSFLLPCDET STGTRYALVV LNQSLPRFTP LLWEHAKLRL CADGGANRIY  60
   61 DELPLFFPNE DALAIRNRYK PDVIKGDMDS IRRDVLDFYI NLGTKVIDES HDQDTTDLDK 120
  121 CILYIRHSTL NQETSGLQIL ATGALGGRFD HEAGNLNVLY RYPDTRIVLL SDDCLIQLLP 180
  181 KTHRHEIHIQ SSLEGPHCGL IPIGTPSAKT TTSGLQWDLS NTEMRFGGLI STSNLVKEEK 240
  241 ITVESDSDLL WTISIKKTGL SIQDHTP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.69897
Match: 1ig3A
Description: Thiamin pyrophosphokinase, substrate-binding domain; Thiamin pyrophosphokinase, catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle