| Protein: | gi|42571303 |
| Organism: | Arabidopsis thaliana |
| Length: | 623 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571303.
| Description | E-value | Query Range |
Subject Range |
|
|
692.0 | [0..1] | [623..1] |
|
|
655.0 | [0..1] | [618..1] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MASRPGALTE WPWSPLGSFK YLLVAPLVMA SMHSYVTAVD EEKDLSRLMI VVLMLWRIVH 60
61 SQIWISVSRQ RTAKGTNKIV DKPIEFEQVD RERTWD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.827 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.778 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.778 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.772 | N/A | N/A | a.24.29 | Description not found. |
| View | Download | 0.771 | N/A | N/A | a.24.18 | Description not found. |
| View | Download | 0.753 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.730 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.614 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.549 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
|
Region A: Residues: [97-272] |
1 11 21 31 41 51
| | | | | |
1 DQVIFNTLLM YLANIKLPGA SHLPPWRLDG AILMALLHAG PVEFLYYWFH RALHHHFLYS 60
61 RYHSHHHSSI VTEPITSVVH PFAEHIAYTL LFAIPMVTAS LCGILSIVSI MGYITYIDFM 120
121 NNMGHCNFEL FPKRLFHLFP PLKFLCYTPS FHSLHHTQFR TNYSLFMPIY DFIYGT
|
| Detection Method: | |
| Confidence: | 24.552842 |
| Match: | PF04116.4 |
| Description: | No description for PF04116.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [273-480] |
1 11 21 31 41 51
| | | | | |
1 TDNLTDSLYE RSLEIEEESP DVIHLTHLTT HNSIYQMRLG FPSLSSCPLW SRPPWYLTCF 60
61 MWPFTLLCSF ALTSAIPLRT FVFERNRLRD LTVHSHLLPK FSFHRHHESI NTIIEEAILE 120
121 ADEKGVKVMS LGLMNNREEL NGSGEMYVQK YPKLKIRLVD GSSMAATVVI NNIPKEATEI 180
181 VFRGNLTKVA SAVVFALCQK GVKVVVLR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.926 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.926 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.881 | c.6.2 | Glycoside hydrolase/deacetylase |
| View | Download | 0.865 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.865 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.821 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.758 | c.1.17 | Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain |
| View | Download | 0.758 | c.1.17 | Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain |
| View | Download | 0.741 | c.1.17 | Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain |
| View | Download | 0.733 | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.467 | c.116.1 | alpha/beta knot |
| View | Download | 0.449 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.416 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.380 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.372 | d.58.4 | Dimeric alpha+beta barrel |
|
Region A: Residues: [481-623] |
1 11 21 31 41 51
| | | | | |
1 EEEHSKLIKS GVDKNLVLST SNSYYSPKVW LVGDGIENEE QMKAKEGTLF VPFSHFPPNK 60
61 LRKDCFYQST PAMRVPKSAQ NIDSCENWLG RRVMSAWKIG GIVHALEGWE EHDCGNTCNV 120
121 LRLHAIWEAA LRHDFQPLPP SPL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.441 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.441 | N/A | N/A | c.23.5 | Flavoproteins |
| View | Download | 0.441 | N/A | N/A | c.23.5 | Flavoproteins |
| View | Download | 0.419 | N/A | N/A | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.410 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.399 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.399 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.392 | N/A | N/A | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.324 | N/A | N/A | d.188.1 | Prokaryotic ribosomal protein L17 |
