| Protein: | gi|42571869 |
| Organism: | Arabidopsis thaliana |
| Length: | 328 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571869.
| Description | E-value | Query Range |
Subject Range |
|
|
154.0 | [0..12] | [260..115] |
|
|
152.0 | [0..8] | [259..1] |
|
|
152.0 | [0..6] | [259..3] |
|
|
151.0 | [0..6] | [259..3] |
|
Region A: Residues: [1-177] |
1 11 21 31 41 51
| | | | | |
1 MAIARTGVYV DDYLEYASTF PAELQRLLNT VRELDERSQS LINQTRQQTK YCLGLASQSS 60
61 KKGNGNHYNN GGLDEEETIE KMRKEIESSQ ENALSLCTEK VLLARQAYDL IDSHVKRLDE 120
121 DLNNFAEDLK QEGKIPPDEP SVLPPLPIVP KAEKRKSFYG TPQPKKIDYR DRDWDRD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [178-264] |
1 11 21 31 41 51
| | | | | |
1 RDFELMPPPG SNRKDLMPIE EQPIDPNEPT YCVCHQVSFG DMIACDNENV SLLSQHLIIY 60
61 FLMYSCYDET FCSCFDSAKE VNGFTIH
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 1weuA |
| Description: | Solution structure of PHD domain in ING1-like protein BAC25009 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [265-328] |
1 11 21 31 41 51
| | | | | |
1 ALASHLRPDS KGNGTAPPAD SSHSHTNIIC TCEKVPLASS LAPSLHDQCH QTHLSCYPTS 60
61 SKCK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.636 | N/A | N/A | a.159.5 | Description not found. |
| View | Download | 0.444 | N/A | N/A | a.159.2 | FF domain |
| View | Download | 0.442 | N/A | N/A | a.7.17 | Description not found. |
| View | Download | 0.403 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.374 | N/A | N/A | a.60.16 | Description not found. |
| View | Download | 0.373 | N/A | N/A | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.370 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.317 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.301 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
