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View Structure Prediction Details

Protein: DRL17_ARATH
Organism: Arabidopsis thaliana
Length: 762 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRL17_ARATH.

Description E-value Query
Range
Subject
Range
DRL17_ARATH, DR1... - Putative disease resistance protein At1g61300 - Arabidopsis thaliana (Mouse-ear cress), (O64790) Put...
343.0 [0..1] [762..1]

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Predicted Domain #1
Region A:
Residues: [1-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCCFSVQFS FDDQTLVRIF NFLCGNINRN SFGVEERPTQ PTIGQEEMLE KAWNRLMEDR  60
   61 VGIMGLHGMG GVGKTTLFKK IHNKFAKMSS RFDIVIWIVV SKGAKLSKLQ EDIAEKLHLC 120
  121 DDLWKNKNES DKATDIHRVL KGKRFVLMLD DIWEKVDLEA IGVPYPSEVN KCKVAFTTRD 180
  181 QKVCGEMGDH KPMQVKCLEP EDAWELFKNK VGDNTLRSDP VIVELAREVA QKCRGLPLAL 240
  241 SVIGETMASK TMVQEWEHAI DVLTRSAAEF SNMGNKILPI LKYSYDSLGD EHIKSCFLYC 300
  301 ALFPEDDEIY NEKLIDYWIC EGFIGEDQVI KRARNKGYEM LGTLTLANLL TKVGTEHVVM 360
  361 HDVVREMALW IASDFGKQKE NFVVRARVGL HERPEAKDWG AVRRMSLMDN HIEEITCESK 420
  421 CSELTTLFLQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.09691
Match: 1z6tA
Description: Structure of the apoptotic protease-activating factor 1 bound to ADP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [431-762]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNQLKNLSGE FIRYMQKLVV LDLSYNRDFN KLPEQISGLV SLQFLDLSNT SIKQLPVGLK  60
   61 KLKKLTFLNL AYTVRLCSIS GISRLLSLRL LRLLGSKVHG DASVLKELQK LQNLQHLAIT 120
  121 LSAELSLNQR LANLISILGI EGFLQKPFDL SFLASMENLS SLWVKNSYFS EIKCRESETA 180
  181 SSYLRINPKI PCFTNLSRLG LSKCHSIKDL TWILFAPNLV YLYIEDSREV GEIINKEKAT 240
  241 NLTSITPFLK LERLILYNLP KLESIYWSPL HFPRLLIIHV LDCPKLRKLP LNATSVPLVE 300
  301 EFQIRMYPPG LGNELEWEDE DTKNRFVLSI KK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.0
Match: 2z63A
Description: No description for 2z63A was found.

YRC Informatics Platform - Version 3.0
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