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View Structure Prediction Details

Protein: SPA1_ARATH
Organism: Arabidopsis thaliana
Length: 1029 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SPA1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL  60
   61 TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA GKFEHLYRLA RG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAFRAGDGDL DSQPRDMDQM LSRIRQQLAG APSERQNLKP FMSRRSDQNL EAFSERLRAA  60
   61 GENSIMNAPA LISEGVQMKT PVSSSNFSQL LLKRAMKGKG VVGKNQETPP EFVSDQDLGS 120
  121 KEKKLDISKS PTPHDVLPLK SSPKGNGMVS HGDGNHSKSS IGISLREFLR SSYAKREKRH 180
  181 GLCLFRQLVE LVDSAHSKRL FLLDLRPSLF TLVPSKKLRY IGNFGKNDLE SDVDEDLNRR 240
  241 RPVVEESSSG GRDSKKRKMD LHLNSPGNQL QATSTGRPFK RKSPVIDLNM VDARNPDSCE 300
  301 LQQQDYIKNL SVSSVSRKQS MSTWLEEQWY TCPEEINGED IGEKSNIYAL GVLLFELLCH 360
  361 CESGEMHAAM MADLRHRILP PTFLSKYPKE AGFCLWLLHP EPSSRPSARD ILKSELIC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1qcfA
Description: Hemapoetic cell kinase Hck; Hemopoetic cell kinase Hck; Haemopoetic cell kinase Hck
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [531-618]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL  60
   61 VRSHGAIEKR VQSSPLDEHC TTSSALFV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 2i0eA
Description: No description for 2i0eA was found.

Predicted Domain #4
Region A:
Residues: [619-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTANTDRLMS NIRQLEDAYF FMRSQINLSS SAATARSDKT LKDRDRCSEN QNENQDMSTK  60
   61 GKSSDQLEVF FEGLCKFARY SK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [701-1029]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV  60
   61 EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG FSQYTEHQKR AWSVDFSPSD 120
  121 PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL 180
  181 RYVKTPWCTL AGHEKAVSYV KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK 240
  241 GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ 300
  301 FVSSVCWRKK SNMLVAANST GNMKLLKLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.39794
Match: 2gnqA
Description: No description for 2gnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle