| Protein: | gi|576261, gi|57... |
| Organism: | Homo sapiens |
| Length: | 204 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|576261, gi|57....
| Description | E-value | Query Range |
Subject Range |
|
|
211.0 | [0..1] | [204..20] |
|
|
202.0 | [0..1] | [204..20] |
|
|
202.0 | [0..1] | [204..20] |
|
|
202.0 | [0..2] | [203..116] |
|
|
202.0 | [0..1] | [204..20] |
|
|
201.0 | [0..3] | [203..640] |
|
Region A: Residues: [1-204] |
1 11 21 31 41 51
| | | | | |
1 HTDLSGKVFV FPRESVTDHV NLITPLEKPL QNFTLCFRAY SDLSRAYSLF SYNTQGRDNE 60
61 LLVYKERVGE YSLYIGRHKV TSKVIEKFPA PVHICVSWES SSGIAEFWIN GTPLVKKGLR 120
121 QGYFVEAQPK IVLGQEQDSY GGKFDRSQSF VGEIGDLYMW DSVLPPENIL SAYQGTPLPA 180
181 NILDWQALNY EIRGYVIIKP LVWV
|
| Detection Method: |  |
| Confidence: | 52.045757 |
| Match: | 1gykA |
| Description: | Serum amyloid P component (SAP) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| bacterial cell surface binding | 2.42404943659494 | bayes_pls_golite062009 |
| monosaccharide binding | 2.2299537316674 | bayes_pls_golite062009 |
| carbohydrate binding | 1.90829797790335 | bayes_pls_golite062009 |
| binding | 1.49960529341364 | bayes_pls_golite062009 |
| sugar binding | 1.27754120053722 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.02180056687529 | bayes_pls_golite062009 |
| polysaccharide binding | 0.85889680769129 | bayes_pls_golite062009 |
| pattern binding | 0.83687933614214 | bayes_pls_golite062009 |
| heparin binding | 0.831838523439571 | bayes_pls_golite062009 |
| transporter activity | 0.768283508128459 | bayes_pls_golite062009 |
| receptor binding | 0.60563836761885 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 0.52360080681204 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.508842034055442 | bayes_pls_golite062009 |
| protein binding | 0.501917973797597 | bayes_pls_golite062009 |
| cell surface binding | 0.445616177401277 | bayes_pls_golite062009 |
| unfolded protein binding | 0.434943099544291 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.187717152616782 | bayes_pls_golite062009 |
| nucleic acid binding | 0.171925518657448 | bayes_pls_golite062009 |
