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View Structure Prediction Details

Protein: gi|164623746
Organism: Papio anubis
Length: 388 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|164623746.

Description E-value Query
Range
Subject
Range
gi|74315943, gi|... - gi|74315943|ref|NP_001028277.1| ERGIC and golgi 3 isoform 1 [Danio rerio], gi|72679324|gb|AAI00126.1...
0.0 [1..388] [1..388]
gi|62646208, gi|... - gi|62646208|ref|XP_215908.3| PREDICTED: similar to serologically defined breast cancer antigen 84 is...
0.0 [1..388] [56..443]
gi|109092200 - gi|109092200|ref|XP_001098885.1| PREDICTED: ERGIC and golgi 3 isoform 2 [Macaca mulatta]
0.0 [1..388] [1..388]
gi|22760064 - gi|22760064|dbj|BAC11054.1| unnamed protein product [Homo sapiens]
0.0 [1..388] [1..388]
ERGI3_XENLA - Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus laevis GN=ergic3 PE=2 SV=1
0.0 [1..388] [1..389]
ERGI3_PONPY - Endoplasmic reticulum-Golgi intermediate compartment protein 3 - Pongo pygmaeus (Orangutan)
ERGI3_PONAB - Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
0.0 [1..388] [1..383]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALGKLKQF DAYPKTLEDF RVKTCGGATV TIVSGLLMLL LFLSELQYYL TTEVHPELYV  60
   61 DKSRGDKLKI NIDVLFPHMP CAYLSIDAMD VAGEQQLDVE HNLFKQRLDK DGIPVSSEAE 120
  121 RHELGKVEVT VFDPDSLDPD RCESC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [146-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGAEAEDIKC CNTCEDVREA YRRRGWAFKN PDTIEQCRRE GFSQKMQEQK NEGCQVYGFL  60
   61 EVNKVAGNFH FAPGKSFQQS HVHVHAVEIH DLQSFGLD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.563 b.61.1 Avidin/streptavidin
View Download 0.477 d.169.1 C-type lectin-like
View Download 0.321 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.275 d.129.1 TATA-box binding protein-like
View Download 0.239 d.16.1 FAD-linked reductases, C-terminal domain

Predicted Domain #3
Region A:
Residues: [244-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NINMTHYIQH LSFGEDYPGI VNPLDHTNVT APQASMMFQY FVKVVPTVYM KVDGEVLRTN  60
   61 QFSVTRHEKV ANGLLGDQGL PGVFVLYELS PMMVKLTEKH RSFTHFLTGV CAIIGGMFTV 120
  121 AGLIDSLIYH SARAIQKKID LGKTT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.492 N/A N/A d.95.2 Homing endonucleases
View Download 0.233 N/A N/A d.95.2 Homing endonucleases
View Download 0.233 N/A N/A b.1.2 Fibronectin type III
View Download 0.229 N/A N/A b.1.2 Fibronectin type III
View Download 0.224 N/A N/A b.1.2 Fibronectin type III


YRC Informatics Platform - Version 3.0
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