| Protein: | ec-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1712 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ec-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1240.0 | [0..31] | [1712..64] |
|
Region A: Residues: [1-415] |
1 11 21 31 41 51
| | | | | |
1 MDTAAIKTSL PHAPLAGQQQ PQQAQTTTAM AVAPTTITNA QTSAINAKNN IGAFFQTCKV 60
61 LWHLDAFRRS FRGLNQHVCG GQDCIFCALK ELFQQLQTSS EPALCPEPLR RALASGPLAG 120
121 RRFPLGCLGD AAECFELLLH RVHSHISPDD GDSCESSACI AHRRFAMRVI EQSVCKCGAN 180
181 SEQLPFTQMV HYVSASALTS QKSLALQSHQ QLSFGQLLRA AGNMGDIRDC PNTCGAKIGI 240
241 CRALLNRPEV VSIGIVWDSE RPAADQVHAV LKAVGTSLRL GDVFHQVSEP RWAQQTQHEL 300
301 VGIVSYYGKH YTTFFFHTKL KVWVYFDDAN VKEVGPSWEG VVDKCSRGRY QPLLLLYAVP 360
361 QQPTVGNGVG IGHVDVAMPA SAPSIAGSVV RRAVTPSPEK PSLGNTRRAI TPTPL
|
| Detection Method: |  |
| Confidence: | 3.1 |
| Match: | 1nb8A |
| Description: | Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cysteine-type peptidase activity | 0.560349219089937 | bayes_pls_golite062009 |
| binding | 0.1527582694371 | bayes_pls_golite062009 |
| protein binding | 0.139172653049021 | bayes_pls_golite062009 |
|
Region A: Residues: [416-587] |
1 11 21 31 41 51
| | | | | |
1 RTPPNDYQNL SVIQKNIFPS NLAMGTDETD AYISRKTVEH VLSAQYQNLS VIQDKIGGGN 60
61 GVGVGQQSVD KDGGFLSRKP IEAVLSAQLA RRQHLQLQRS HSAESSSGHA SSNGSSPPSD 120
121 GLTMPEHLNQ PRRRDSGNWS GDRNSASSAS STTLDNPYLY MVAKRGVAAV PQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [588-777] |
1 11 21 31 41 51
| | | | | |
1 SPTRHGLPYD PGYDSFSLSS TDSYPPKHAL NPQLAKIPEA AMGVVPNGGA MPHGHGNGQL 60
61 ALSGDCEKLC HEADQLLEKS RLVEESHDLE TALVLCNAAA GRARAAMDAP YSNPHTMTFA 120
121 RMKHNTCVMR ARSLHRRILV EKGAETEAMP ELKHMREGST SSVKHVRQNS KDRTLEKEQQ 180
181 QLQFQQIQQI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [778-962] |
1 11 21 31 41 51
| | | | | |
1 QQIHQIQQQI PASIEIYATL PKRKSPLKAL ASASACDDNA IEYEQEKQLA TSPGKPERES 60
61 RSLFGRKDKE KEKRSRSEDR NKLTREFSLT ETLLVNAKDT LKKHKEDKDE KKEKDKSGKK 120
121 QHKIRRKLLM GGLIRRKNRS MPDLTEAVDD STANAGITHH PHYPAQGVTT AGTLLGTSVD 180
181 DSAVG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [963-1048] |
1 11 21 31 41 51
| | | | | |
1 LGKHGHGMSG YISEGHFDYS GSGSASNSGA GSNPNPNLER SKLMRKSFHG SGRQLTMVPK 60
61 VAPPPPMRTS STLTPQQQQQ QQQQFH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1049-1402] |
1 11 21 31 41 51
| | | | | |
1 HEANLSNLSA MSSNTSISED SCQTIITTCA QVHSEQSPLK DLQMLVAQDE LPLPPPMELP 60
61 PYPSPPHSSC HSRQASEDFP PPPPPELDLE PLNQQLSQLQ ALEAASKQQR QQLESLEGTT 120
121 SILAQLQQRQ HLLKLRKEQA NHPGAATTDA TWLKELQAKQ ANDLRAMQRK LEASSPSSVR 180
181 DLTHRFEQTS IRSYASQELL SQPGQSQQLG QLRTQMNGLP NGNAKMDVDE VDAMPAVRNS 240
241 LPAALSAHQL LPKPKYEMTQ SQIAEEIREV ELLNTMVQQT LNQNGAAALP KRVKKKSVSF 300
301 CDQVILVATA GNEEDDDFIP NPILERVLRT AQHPNEKVTA QMIQQQQQNM MRLQ
|
| Detection Method: | |
| Confidence: | 17.221849 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1403-1712] |
1 11 21 31 41 51
| | | | | |
1 TEAQPRQQQV QQLQQPSPML GRPAGATADM QRYVQRMQQQ QQQQQQQQQQ QQQQQQQQQQ 60
61 QQQQQQQQQQ QHQELYRQQQ LHRTSMSGIA SQQHLQQLDA QYTTMPRPLH HSQLGSYSVT 120
121 LQKHQQLQQQ QQQQQQQQAP QQLSLGYFSN GSVATSEQVP LPSPYQRVPL PHGYQPAAAG 180
181 PYYPLPNAQQ HLQQQQLMAK PVQKKVSFEP GTKGEADCLP PPPPPPQKNG LPETGSAGSG 240
241 HPGAAPGASG AGGTTSAGIT AIPTRVYNNA IVKASAKAVE CNLCRKRHVI APAVYCTNCE 300
301 YYLQMLNQRR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
