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View Structure Prediction Details

Protein: gi|45752632, gi|...
Organism: Arabidopsis thaliana
Length: 104 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45752632, gi|....

Description E-value Query
Range
Subject
Range
gi|15277711 - gi|15277711|gb|AAK93966.1|AF397403_1 translation elongation factor 1 alpha 1-like 14 [Homo sapiens]
186.0 [0..1] [104..283]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHLGQIKNG YTPVLDCHTS HIAVKFSEIL TKIDWRTGHE IEKEPKFLKN SEAAIINMTP  60
   61 TKPMVVEAYS AYPPLGRFAI RDMRQTVGVG VIKSVVKKDP SGAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.0
Match: 1f60A
Description: Elongation factor eEF-1alpha, domain 2; Elongation factor eEF-1alpha, C-terminal domain; Elongation factor eEF-1alpha, N-terminal (G) domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle