YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|218771397, gi...
Organism:	Pseudomonas aeruginosa LESB58
Length:	118 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218771397, gi....

Description	E-value	Query Range	Subject Range
gi\|115364038, gi... - gi\|115378962\|ref\|ZP_01466095.1\| 6-pyruvoyl tetrahydropterin synthase family [Stigmatella aurantiaca ...	8.0E-43	[1..118]	[656..773]
gi\|104781054, gi... - gi\|95110041\|emb\|CAK14746.1\| putative 6-pyruvoyl tetrahydrobiopterin synthase SscR [Pseudomonas entom... gi\|95110041 - gi\|95110041\|emb\|CAK14746.1\| putative 6-pyruvoyl tetrahydrobiopterin synthase SscR [Pseudomonas entom...	5.0E-42	[1..118]	[1..118]
gi\|71557763, gi\|... - gi\|71737210\|ref\|YP_275300.1\| 6-pyruvoyl tetrahydrobiopterin synthase, putative [Pseudomonas syringae...	5.0E-42	[1..118]	[1..118]
gi\|46187340, gi\|... - gi\|66046444\|ref\|YP_236285.1\| putative 6-pyruvoyl tetrahydropterin synthase [Pseudomonas syringae pv....	2.0E-41	[1..118]	[1..118]
gi\|85813928 - gi\|85813928\|emb\|CAF31557.1\| putative fortimicin production protein [Micromonospora olivasterospora]	3.0E-41	[1..118]	[1..117]
gi\|86574009, gi\|... - gi\|86750981\|ref\|YP_487477.1\| putative 6-pyruvoyl tetrahydropterin synthase [Rhodopseudomonas palustr...	3.0E-41	[1..118]	[1..118]
gi\|85814033 - gi\|85814033\|emb\|CAF31449.1\| putative gentamicin production protein [Micromonospora echinospora]	3.0E-41	[1..118]	[1..117]
gi\|24983893, gi\|... - gi\|26989065\|ref\|NP_744490.1\| 6-pyruvoyl tetrahydrobiopterin synthase, putative [Pseudomonas putida K... tr\|I7CD29\|I7CD29... - 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Pseudomonas putida (strain DOT-T1E) GN=ygcM PE=3 SV=1 tr\|E4R7A9\|E4R7A9... - 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Pseudomonas putida (strain BIRD-1) GN=PPUBIRD1_3344 P...	4.0E-41	[1..118]	[1..118]
gi\|213925120, gi... - gi\|213970016\|ref\|ZP_03398148.1\| 6-pyruvoyl tetrahydrobiopterin synthase [Pseudomonas syringae pv. to... gi\|28870594, gi\|... - gi\|28870594\|ref\|NP_793213.1\| 6-pyruvoyl tetrahydrobiopterin synthase, putative [Pseudomonas syringae... tr\|Q87ZJ4\|Q87ZJ4... - 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PS...	5.0E-41	[1..118]	[1..118]
gi\|148512694, gi... - gi\|82734835\|ref\|ZP_00897698.1\| 6-pyruvoyl tetrahydrobiopterin synthase, putative [Pseudomonas putida...	6.0E-41	[1..118]	[1..118]

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Predicted Domain #1

Region A:
Residues: [1-118]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELFKEFTFE SAHRLPHVPE GHKCGRLHGH SFRVAIHIEG EVDPHTGWIR DFAEIKAIFK  60
   61 PIYEQLDHNY LNDIPGLENP TSENLCRWIW QQLKPLLPEL SKVRVHETCT SGCEYRGD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	44.69897
Match:	2obaA
Description:	No description for 2obaA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits