YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|208738712, gi...
Organism:	Escherichia coli O157:H7 str. EC4042
Length:	121 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208738712, gi....

Description	E-value	Query Range	Subject Range
gi\|168230400, gi... - gi\|205334916\|gb\|EDZ21680.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|168234885, gi... - gi\|197291713\|gb\|EDY31063.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|205337468, gi... - gi\|205337468\|gb\|EDZ24232.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|205348752, gi... - gi\|205348752\|gb\|EDZ35383.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|167550684, gi... - gi\|205324375\|gb\|EDZ12214.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|205331517, gi... - gi\|205331517\|gb\|EDZ18281.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... lcl\|NC_016856.1_... - [gene=ftsL] [protein=cell division protein FtsL] [protein_id=YP_005235780.1] [location=142057..14242... gi\|205271241, gi... - gi\|205351460\|ref\|YP_002225261.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|206707438, gi... - gi\|207855635\|ref\|YP_002242286.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|213052856 - gi\|213052856\|ref\|ZP_03345734.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|213426161 - gi\|213426161\|ref\|ZP_03358911.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|197361329, gi... - gi\|197361329\|ref\|YP_002140964.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|198242976, gi... - gi\|198242976\|ref\|YP_002214073.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|199604598, gi... - gi\|200387500\|ref\|ZP_03214112.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|204926902, gi... - gi\|204926902\|ref\|ZP_03218104.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... FTSL_SALTY - Cell division protein FtsL OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=ftsL P... gi\|194456693, gi... - gi\|194470329\|ref\|ZP_03076313.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|29136290, gi\|... - gi\|29140666\|ref\|NP_804008.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar... gi\|194737711, gi... - gi\|194737711\|ref\|YP_002113139.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|197214276, gi... - gi\|197250573\|ref\|YP_002145107.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|25367070, gi\|... - gi\|25367070\|pir\|\|AF0517 cell division protein FtsL [imported] - Salmonella enterica subsp. enterica ... gi\|197242234, gi... - gi\|197263979\|ref\|ZP_03164053.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|168464327, gi... - gi\|195632742\|gb\|EDX51196.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|205342475, gi... - gi\|205342475\|gb\|EDZ29239.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|16759116 - gi\|16759116\|ref\|NP_454733.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar... gi\|194404869, gi... - gi\|194446206\|ref\|YP_002039353.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|194448775, gi... - gi\|194448775\|ref\|YP_002044091.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|56126650, gi\|... - gi\|56412393\|ref\|YP_149468.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar... gi\|213979947 - gi\|213979947\|ref\|ZP_03407206.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|224581964, gi... - gi\|224581964\|ref\|YP_002635762.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|237729381, gi... - gi\|237729381\|ref\|ZP_04559862.1\| cell division protein FtsL [Citrobacter sp. 30_2], gi\|226909110\|gb\|E... gi\|238911178 - gi\|238911178\|ref\|ZP_04655015.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|213585690 - gi\|213585690\|ref\|ZP_03367516.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|213612819 - gi\|213612819\|ref\|ZP_03370645.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|213647634 - gi\|213647634\|ref\|ZP_03377687.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|213858023 - gi\|213858023\|ref\|ZP_03384994.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... FTSL_SALTY - Cell division protein FtsL OS=Salmonella typhimurium GN=ftsL PE=3 SV=1	150.0	[0..1]	[121..1]
gi\|62178688, gi\|... - gi\|62178688\|ref\|YP_215105.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar...	147.0	[0..1]	[121..1]
gi\|75511693 - gi\|75511693\|ref\|ZP_00734331.1\| COG3116: Cell division protein [Escherichia coli 53638] gi\|75256045 - gi\|75256045\|ref\|ZP_00727758.1\| COG3116: Cell division protein [Escherichia coli E22] gi\|75235488 - gi\|75235488\|ref\|ZP_00719692.1\| COG3116: Cell division protein [Escherichia coli F11] gi\|75229068 - gi\|75229068\|ref\|ZP_00715648.1\| COG3116: Cell division protein [Escherichia coli B7A] gi\|75209396 - gi\|75209396\|ref\|ZP_00709628.1\| COG3116: Cell division protein [Escherichia coli B171] gi\|83585195 - gi\|83585195\|ref\|ZP_00923845.1\| COG3116: Cell division protein [Escherichia coli 101-1]	131.0	[0..16]	[121..1]
gi\|77958242 - gi\|77958242\|ref\|ZP_00822279.1\| COG3116: Cell division protein [Yersinia bercovieri ATCC 43970] gi\|77962091 - gi\|77962091\|ref\|ZP_00825916.1\| COG3116: Cell division protein [Yersinia mollaretii ATCC 43969]	126.0	[0..16]	[121..1]
gi\|77976107 - gi\|77976107\|ref\|ZP_00831640.1\| COG3116: Cell division protein [Yersinia frederiksenii ATCC 33641]	125.0	[0..16]	[121..1]
gi\|75823702, gi\|... - gi\|75823702\|ref\|ZP_00753187.1\| COG3116: Cell division protein [Vibrio cholerae RC385], gi\|116216871\|... gi\|75829622, gi\|... - gi\|75829622\|ref\|ZP_00758919.1\| COG3116: Cell division protein [Vibrio cholerae MO10], gi\|254849530\|r... gi\|75827675, gi\|... - gi\|75827675\|ref\|ZP_00757110.1\| COG3116: Cell division protein [Vibrio cholerae O395], gi\|227118852\|r... gi\|121728370, gi... - gi\|75816043\|ref\|ZP_00746526.1\| COG3116: Cell division protein [Vibrio cholerae V52], gi\|121728370\|re... FTSL_VIBCH - Cell division protein FtsL OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) ... FTSL_VIBCH - Cell division protein FtsL OS=Vibrio cholerae GN=ftsL PE=3 SV=1 gi\|229369691, gi... - gi\|229607036\|ref\|YP_002877684.1\| hypothetical protein VCD_001945 [Vibrio cholerae MJ-1236], gi\|22936... gi\|229332379, gi... - gi\|229528605\|ref\|ZP_04417995.1\| hypothetical protein VCG_001691 [Vibrio cholerae 12129(1)], gi\|22933... gi\|229524394, gi... - gi\|229524394\|ref\|ZP_04413799.1\| hypothetical protein VCA_001986 [Vibrio cholerae bv. albensis VL426]... gi\|229341771, gi... - gi\|229521239\|ref\|ZP_04410659.1\| hypothetical protein VIF_001763 [Vibrio cholerae TM 11079-80], gi\|22... gi\|229519410, gi... - gi\|229519410\|ref\|ZP_04408853.1\| hypothetical protein VCC_003440 [Vibrio cholerae RC9], gi\|229344099\|... gi\|229507530, gi... - gi\|229507530\|ref\|ZP_04397035.1\| hypothetical protein VCF_002759 [Vibrio cholerae BX 330286], gi\|2293... gi\|227010419, gi... - gi\|227082531\|ref\|YP_002811082.1\| cell division protein FtsL [Vibrio cholerae M66-2], gi\|227010419\|gb... gi\|150422306, gi... - gi\|254291794\|ref\|ZP_04962579.1\| cell division protein FtsL [Vibrio cholerae AM-19226], gi\|197750881\|... gi\|121587621, gi... - gi\|121587621\|ref\|ZP_01677385.1\| cell division protein FtsL [Vibrio cholerae 2740-80], gi\|121548131\|g... gi\|153214094, gi... - gi\|153214094\|ref\|ZP_01949228.1\| cell division protein FtsL [Vibrio cholerae 1587], gi\|124115520\|gb\|E... gi\|153826870, gi... - gi\|153826870\|ref\|ZP_01979537.1\| cell division protein FtsL [Vibrio cholerae MZO-2], gi\|149739286\|gb\|... gi\|124117722, gi... - gi\|153224282\|ref\|ZP_01954351.1\| cell division protein FtsL [Vibrio cholerae MAK 757], gi\|124117722\|g... gi\|148874156, gi... - gi\|153830349\|ref\|ZP_01983016.1\| cell division protein FtsL [Vibrio cholerae 623-39], gi\|148874156\|gb... gi\|153802791, gi... - gi\|153802791\|ref\|ZP_01957377.1\| cell division protein FtsL [Vibrio cholerae MZO-3], gi\|124121656\|gb\|... gi\|153818409, gi... - gi\|153818409\|ref\|ZP_01971076.1\| cell division protein FtsL [Vibrio cholerae NCTC 8457], gi\|126511042... gi\|229512274, gi... - gi\|229512274\|ref\|ZP_04401753.1\| hypothetical protein VCE_003686 [Vibrio cholerae B33], gi\|229352239\|...	124.0	[0..16]	[121..1]
gi\|77977559 - gi\|77977559\|ref\|ZP_00833004.1\| COG3116: Cell division protein [Yersinia intermedia ATCC 29909]	123.0	[0..16]	[121..1]
gi\|13537267 - gi\|13537267\|dbj\|BAB40619.1\| hypothetical protein [Vibrio proteolyticus]	123.0	[0..18]	[121..2]
gi\|50122744, gi\|... - gi\|50122744\|ref\|YP_051911.1\| cell division protein FtsL [Pectobacterium atrosepticum SCRI1043], gi\|4...	122.0	[0..16]	[121..1]
gi\|152959452, gi... - gi\|77631661\|ref\|ZP_00794247.1\| COG3116: Cell division protein [Yersinia pseudotuberculosis IP 31758]... gi\|149289825, gi... - gi\|150260417\|ref\|ZP_01917145.1\| putative cell division protein [Yersinia pestis CA88-4125], gi\|14928... gi\|145600349, gi... - gi\|145600349\|ref\|YP_001164425.1\| cell division protein FtsL [Yersinia pestis Pestoides F], gi\|145212... gi\|229837061, gi... - gi\|229837061\|ref\|ZP_04457226.1\| membrane bound cell division protein at septum containing leucine zi... gi\|229696802, gi... - gi\|229840436\|ref\|ZP_04460595.1\| membrane bound cell division protein at septum containing leucine zi... gi\|229843022, gi... - gi\|229843022\|ref\|ZP_04463172.1\| membrane bound cell division protein at septum containing leucine zi... gi\|77633636, gi\|... - gi\|77633636\|ref\|ZP_00795758.1\| COG3116: Cell division protein [Yersinia pestis Angola], gi\|162421906... gi\|165928202, gi... - gi\|165928202\|ref\|ZP_02224034.1\| cell division protein FtsL [Yersinia pestis biovar Orientalis str. F... gi\|22127507, gi\|... - gi\|22127507\|ref\|NP_670930.1\| cell division protein FtsL [Yersinia pestis KIM], gi\|21960605\|gb\|AAM871... FTSL_YERPE - Cell division protein FtsL OS=Yersinia pestis GN=ftsL PE=3 SV=1 gi\|89104753, gi\|... - gi\|89104753\|ref\|ZP_01177287.1\| COG3116: Cell division protein [Yersinia pestis biovar Orientalis str... gi\|51595031, gi\|... - gi\|51595031\|ref\|YP_069222.1\| cell division protein FtsL [Yersinia pseudotuberculosis IP 32953], gi\|5... gi\|45443368, gi\|... - gi\|45443368\|ref\|NP_994907.1\| cell division protein FtsL [Yersinia pestis biovar Microtus str. 91001]... gi\|16120876, gi\|... - gi\|218927744\|ref\|YP_002345619.1\| cell division protein FtsL [Yersinia pestis CO92], gi\|16120876\|ref\|... Q66EL2\|Q66EL2_YERPS - Cell division protein; ingrowth of wall at septum - Yersinia pseudotuberculosis gi\|166211912, gi... - gi\|166211912\|ref\|ZP_02237947.1\| cell division protein FtsL [Yersinia pestis biovar Antiqua str. B420... gi\|166008935, gi... - gi\|166008935\|ref\|ZP_02229833.1\| cell division protein FtsL [Yersinia pestis biovar Antiqua str. E197... gi\|167421901, gi... - gi\|167421901\|ref\|ZP_02313654.1\| cell division protein FtsL [Yersinia pestis biovar Orientalis str. M... gi\|167401296, gi... - gi\|167401296\|ref\|ZP_02306796.1\| cell division protein FtsL [Yersinia pestis biovar Antiqua str. UG05... gi\|108809544, gi... - gi\|108809544\|ref\|YP_653460.1\| cell division protein FtsL [Yersinia pestis Antiqua], gi\|108781457\|gb\|... gi\|167470127 - gi\|167470127\|ref\|ZP_02334831.1\| cell division protein FtsL [Yersinia pestis FV-1] gi\|108774227, gi... - gi\|229900771\|ref\|ZP_04515895.1\| membrane bound cell division protein at septum containing leucine zi... gi\|167426491, gi... - gi\|167426491\|ref\|ZP_02318244.1\| cell division protein FtsL [Yersinia pestis biovar Mediaevalis str. ... gi\|186894037, gi... - gi\|186894037\|ref\|YP_001871149.1\| cell division protein FtsL [Yersinia pseudotuberculosis PB1/+], gi\|... gi\|170025740, gi... - gi\|170025740\|ref\|YP_001722245.1\| cell division protein FtsL [Yersinia pseudotuberculosis YPIII], gi\|...	121.0	[0..16]	[119..1]

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Predicted Domain #1

Region A:
Residues: [1-121]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRVTEALS KVKGSMGSHE RHALPGVIGD DLLRFGKLPL CLFICIILTA VTVVTTAHHT  60
   61 RLLTAQREQL VLERDALDIE WRNLILEENA LGDHSRVERI ATEKLQMQHV DPSQENIVVQ 120
  121 K

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	64.886057
Match:	PF04999.4
Description:	No description for PF04999.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits