| Protein: | gi|186516984, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 376 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|186516984, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
408.0 | [0..1] | [376..1] |
|
|
371.0 | [0..3] | [375..2] |
|
|
366.0 | [0..1] | [366..9] |
|
|
366.0 | [0..5] | [374..1] |
|
|
365.0 | [0..2] | [366..7] |
|
|
362.0 | [0..8] | [366..11] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MAPSTKVLSL LLLYVVVSLA SGDESIINDH LQLPSDGKWR TDEEVRSIYL QWSAEHGKTN 60
61 NNNNGIINDQ DKRFNIFKDN LRFIDLHNEN NKNATYKLGL TKFTDLTNDE YRKLYLGART 120
121 EP
|
| Detection Method: |  |
| Confidence: | 14.568636 |
| Match: | PF08246.4 |
| Description: | No description for PF08246.4 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [123-376] |
1 11 21 31 41 51
| | | | | |
1 ARRIAKAKNV NQKYSAAVNG KEVPETVDWR QKGAVNPIKD QGTCGSCWAF STTAAVEGIN 60
61 KIVTGELISL SEQELVDCDK SYNQGCNGGL MDYAFQFIMK NGGLNTEKDY PYRGFGGKCN 120
121 SFLKNSRVVS IDGYEDVPTK DETALKKAIS YQPVSVAIEA GGRIFQHYQS GIFTGSCGTN 180
181 LDHAVVAVGY GSENGVDYWI VRNSWGPRWG EEGYIRMERN LAASKSGKCG IAVEASYPVK 240
241 YSPNPVRGNT ISSV
|
| Detection Method: | |
| Confidence: | 77.69897 |
| Match: | 1s4vA |
| Description: | The 2.0 A crystal structure of the KDEL-tailed cysteine endopeptidase functioning in programmed cell death of Ricinus communis endosperm |
Matching Structure (courtesy of the PDB): |
|
