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View Structure Prediction Details

Protein: gi|213425461
Organism: Salmonella enterica subsp. enterica serovar Typhi str. E02-1180
Length: 210 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|213425461.

Description E-value Query
Range		 Subject
Range
EFTU_CALS8 - Elongation factor Tu OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 63...
 4.0E-37 [15..207] [1..215]
EFTU_STIAU - Elongation factor Tu OS=Stigmatella aurantiaca GN=tuf PE=3 SV=2
 8.0E-37 [15..207] [1..212]
EFTU_PARDP - Elongation factor Tu OS=Paracoccus denitrificans (strain Pd 1222) GN=tuf1 PE=3 SV=1
 1.0E-36 [15..207] [1..207]
gi|115366877, gi... - gi|115378468|ref|ZP_01465627.1| translation elongation factor Tu [Stigmatella aurantiaca DW4/3-1], g...
 1.0E-36 [15..207] [1..212]
EFTU2_MYXXD - Elongation factor Tu 2 OS=Myxococcus xanthus (strain DK 1622) GN=tuf2 PE=3 SV=1
 2.0E-36 [15..207] [1..212]
EFTU_ANADE - Elongation factor Tu OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tuf1 PE=3 SV=1
 2.0E-36 [15..207] [1..212]
EFTU_NITWN - Elongation factor Tu OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=tuf PE=3 SV=1
 2.0E-36 [15..207] [1..212]
EFTU1_SHESR - Elongation factor Tu 1 OS=Shewanella sp. (strain MR-7) GN=tuf1 PE=3 SV=1
EFTU1_SHESM - Elongation factor Tu 1 OS=Shewanella sp. (strain MR-4) GN=tuf1 PE=3 SV=1
 2.0E-36 [15..207] [1..210]
EFTU_ACICJ - Elongation factor Tu OS=Acidiphilium cryptum (strain JF-5) GN=tuf PE=3 SV=1
 2.0E-36 [15..207] [1..211]

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Predicted Domain #1
Region A:
Residues: [1-210] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNLNYQQTH FVMSAPDIRH LPSDCGIEVA FAGRSNAGKS SALNTLTNQK SLARTSKTPG  60
   61 RTQLINLFEV VDGKRLVDLP GYGYAEVPEE MKRKWQRALG EYLEKRQSLQ GLVVLMDIRH 120
  121 PLKDLDQQMI QWAVESNIQV LVLLTKADKL ASGARKAQLN MVREAVLAFN GDVQVEAFSS 180
  181 LKKQGVDKLR QKLDSWFSEL APVEEIQDGE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.154902
Match: 1puiA
Description: Probable GTPase EngB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.00104173493322 bayes_pls_golite062009
binding 0.594070128851006 bayes_pls_golite062009
nucleotide binding 0.420363502101565 bayes_pls_golite062009
purine ribonucleotide binding 0.367411877498365 bayes_pls_golite062009
ribonucleotide binding 0.36722531399857 bayes_pls_golite062009
purine nucleotide binding 0.356791014996496 bayes_pls_golite062009
hydrolase activity 0.16290960662326 bayes_pls_golite062009
GTPase activity 7.50328750023177E-4 bayes_pls_golite062009
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