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View Structure Prediction Details

Protein: gi|221318099
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 470 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221318099.

Description E-value Query
Range
Subject
Range
gi|152023392, gi... - gi|89201716|ref|ZP_01180452.1| Protoporphyrinogen oxidase [Bacillus cereus subsp. cytotoxis NVH 391-...
273.0 [0..5] [469..2]

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Predicted Domain #1
Region A:
Residues: [1-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDGKKHVVI IGGGITGLAA AFYMEKEIKE KNLPLELTLV EASPRVGGKI QTVKKDGYII  60
   61 ERGPDSFLER KKSAPQLVKD LGLEHLLVNN ATGQSYVLVN RTLHPMPKGA VMGIPTKIAP 120
  121 FVSTGLFSLS GKARAAMDFI LPASKTKDDQ SLGEFFRRRV GDEVVENLIE PLLSGIYAGD 180
  181 IDKLSLMSTF PQFYQTEQKH RSLILGMKKT RPQGSGQQLT AKKQGQFQTL STGLQTLVEE 240
  241 IEKQLKLTKV YKGTKVTKLS HSGSCYSLEL DNGVTLDADS VIVTAPHKAA AGMLSELPAI 300
  301 SHLKNMHSTS VANVALGFPE GSVQMEHEGT GFVISRNSDF AITACTWTNK KWPHAAPEGK 360
  361 TLLRAYVGKA GDESIVDLSD NDIINIVLED LKKVMNINGE PEMTCVTRWH ESMPQYHVGH 420
  421 KQRIKELREA LASAYPGVYM TGASFEGVGI PDCIDQGKAA VSDALTYLFS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.0
Match: 2ivdA
Description: No description for 2ivdA was found.

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on NADH or NADPH 5.26950448055146 bayes_pls_golite062009
oxidoreductase activity 4.51724585323847 bayes_pls_golite062009
oxygen-dependent protoporphyrinogen oxidase activity 1.3578742399915 bayes_pls_golite062009
binding 1.26657667590853 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 1.20561532241252 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 1.07656675953489 bayes_pls_golite062009
catalytic activity 1.03127962968326 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH group of donors 0.945028138297487 bayes_pls_golite062009
transporter activity 0.890824576391732 bayes_pls_golite062009
transmembrane transporter activity 0.706117386114413 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 0.705416796630992 bayes_pls_golite062009
substrate-specific transporter activity 0.491481205015383 bayes_pls_golite062009
nucleic acid binding 0.386071802386842 bayes_pls_golite062009
NADPH-adrenodoxin reductase activity 0.31749398611457 bayes_pls_golite062009
transcription regulator activity 0.284200164472054 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.26114823844682 bayes_pls_golite062009
DNA binding 0.175069486065946 bayes_pls_golite062009
ferrous iron binding 0.166200528859874 bayes_pls_golite062009
protein binding 0.0281459437915129 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle