| Protein: | gi|208968637 |
| Organism: | synthetic construct |
| Length: | 140 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208968637.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-46 | [1..140] | [1..140] |
|
|
2.0E-46 | [1..140] | [1..140] |
|
|
3.0E-46 | [1..140] | [1..140] |
|
|
4.0E-46 | [3..140] | [59..196] |
|
|
8.0E-46 | [3..140] | [150..287] |
|
|
1.0E-45 | [5..140] | [52..187] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MASVDFKTYV DQACRAAEEF VNVYYTTMDK RRRLLSRLYM GTATLVWNGN AVSGQESLSE 60
61 FFEMLPSSEF QISVVDCQPV HDEATPSQTT VLVVICGSVK FEGNKQRDFN QNFILTAQAS 120
121 PSNTVWKIAS DCFRFQDWAS
|
| Detection Method: |  |
| Confidence: | 47.69897 |
| Match: | 1jkgA |
| Description: | NTF2-related export protein 1 (p15) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleocytoplasmic transporter activity | 4.11811310168752 | bayes_pls_golite062009 |
| protein transporter activity | 3.2858716221712 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.22367856601071 | bayes_pls_golite062009 |
| binding | 2.08734227778958 | bayes_pls_golite062009 |
| RNA binding | 1.98983420561953 | bayes_pls_golite062009 |
| transporter activity | 1.80701285041353 | bayes_pls_golite062009 |
| mRNA binding | 1.39091688795726 | bayes_pls_golite062009 |
| protein binding | 1.36536670483288 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.33804818542017 | bayes_pls_golite062009 |
| structural constituent of nuclear pore | 1.30758304562723 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.22102896992563 | bayes_pls_golite062009 |
| Ran GTPase binding | 1.18290069522408 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.890150150408175 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 0.87831089735211 | bayes_pls_golite062009 |
| macromolecule transmembrane transporter activity | 0.87831089735211 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.446562877324676 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.439519001457896 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.430285640125175 | bayes_pls_golite062009 |
