| Protein: | gi|190408919 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 1117 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190408919.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [41..1117] | [1..1077] |
|
|
1.0E-25 | [550..639] | [231..316] |
|
Region A: Residues: [1-507] |
1 11 21 31 41 51
| | | | | |
1 MPFITSRPVA KNSSHSLSET DLNQSKGQPF QPSPTKKLGS MQQRRRSSTI RHALSSLLGG 60
61 ANVHSPAVLN NTTKGGNNNG NIRSSNTDAQ LLGKKQNKQP PPNARRHSTT AIQGSISDSA 120
121 TTTPRSSTSD TNRRTSGRLS VDQEPRISGG RYSQIEEDST VLDFDDDHNS SAVVSSDLSS 180
181 TSLTRLANSK KFNEQFLIEY LTARGLLGPK TVLSNEYLKI SISTSGESVF LPTISSNDDE 240
241 YLSRLNGLND GTDDAEADFF MDGIDQQEGN TPSLATTAAA TESGGSINEN RDTLLRENNS 300
301 GDHPGSGSEL NTRSVEIDSS MVSYSIAVIV SVKKPTRFTD MQLELCSRVK VFWNTGVPPT 360
361 KTFNEEFYNA ASMKWNLNDE NFDLFVPLSI SPDDQMIENN SNDRQMRLFK NIPTEERLYL 420
421 DKTKTKASLL NAIDVNKTHL YQPGDYVFLV PVVFSNHIPE TIYLPSARVS YRLRLATKAI 480
481 NRKGFYRQDS NSPQPIVSPD SSSSLSS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [508-703] |
1 11 21 31 41 51
| | | | | |
1 TTSSLKLTET ESAQAHRRIS NTLFSKVKNH LHMSSHQLKN EESGEEDIFA EYPIKVIRTP 60
61 PPVAVSTANK PIYINRVWTD SLSYEISFAQ KYVSLNSEVP IKIKLAPICK NVCVKRIHVS 120
121 ITERVTFVSK GYEYEYDQTD PVAKDPYNPY YLDFASKRRK ERSVSLFEIR TKEKGTRALR 180
181 EEIVENSFND NLLSYS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [704-1117] |
1 11 21 31 41 51
| | | | | |
1 PFDDDSDSKG NPKERLGITE PIIIETKLKF PKYEDLDKRT AKIIPPYGID AYTSIPNPEH 60
61 AVANGPSHRR PSVIGFLSGH KGSKSHEENE KPVYDPKFHQ TIIKSNSGLP VKTHTRLNTP 120
121 KRGLYLDSLH FSNVYCRHKL EIMLRISKPD PECPSKLRHY EVLIDTPIFL VSEQCNSGNM 180
181 ELPTYDMATM EGKGNQVPLS MNSDFFGNTC PPPPTFEEAI SVPASPIVSP MGSPNIMASY 240
241 DPDLLSIQQL NLSRTTSVSG PSGYSDDAGV PNVNRNSISN ANAMNGSISN SAFVSGNSGQ 300
301 GVARARATSV NDRSRFNNLD KLLSTPSPVN RSHNSSPTNG LSQANGTVRI PNATTENSKD 360
361 KQNEFFKKGY TLANVKDDEE QEGIVSSSSA DSLLSHGNEP PRYDEIVPLM SDEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [387-878] |
1 11 21 31 41 51
| | | | | |
1 PLSISPDDQM IENNSNDRQM RLFKNIPTEE RLYLDKTKTK ASLLNAIDVN KTHLYQPGDY 60
61 VFLVPVVFSN HIPETIYLPS ARVSYRLRLA TKAINRKGFY RQDSNSPQPI VSPDSSSSLS 120
121 STTSSLKLTE TESAQAHRRI SNTLFSKVKN HLHMSSHQLK NEESGEEDIF AEYPIKVIRT 180
181 PPPVAVSTAN KPIYINRVWT DSLSYEISFA QKYVSLNSEV PIKIKLAPIC KNVCVKRIHV 240
241 SITERVTFVS KGYEYEYDQT DPVAKDPYNP YYLDFASKRR KERSVSLFEI RTKEKGTRAL 300
301 REEIVENSFN DNLLSYSPFD DDSDSKGNPK ERLGITEPII IETKLKFPKY EDLDKRTAKI 360
361 IPPYGIDAYT SIPNPEHAVA NGPSHRRPSV IGFLSGHKGS KSHEENEKPV YDPKFHQTII 420
421 KSNSGLPVKT HTRLNTPKRG LYLDSLHFSN VYCRHKLEIM LRISKPDPEC PSKLRHYEVL 480
481 IDTPIFLVSE QC
|
| Detection Method: | |
| Confidence: | 1.29 |
| Match: | 1jsyA |
| Description: | Arrestin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.80286284844302 | bayes_pls_golite062009 |
| protein binding | 1.608080422834 | bayes_pls_golite062009 |
| transporter activity | 1.10239137184953 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.949536954960448 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.781060752903079 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.660409340901077 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.56446678342098 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.486294295028555 | bayes_pls_golite062009 |
| channel activity | 0.465630241372545 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.465630241372545 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.455589501590218 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.44519612509266 | bayes_pls_golite062009 |
| potassium channel activity | 0.423464159542763 | bayes_pls_golite062009 |
| cation channel activity | 0.406614358442595 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 0.402494949667906 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.39571309893169 | bayes_pls_golite062009 |
| ion channel activity | 0.395022246697853 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.387394052239826 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 0.326855275194847 | bayes_pls_golite062009 |
| gated channel activity | 0.266124158878986 | bayes_pls_golite062009 |
|
Region A: Residues: [879-1117] |
1 11 21 31 41 51
| | | | | |
1 NSGNMELPTY DMATMEGKGN QVPLSMNSDF FGNTCPPPPT FEEAISVPAS PIVSPMGSPN 60
61 IMASYDPDLL SIQQLNLSRT TSVSGPSGYS DDAGVPNVNR NSISNANAMN GSISNSAFVS 120
121 GNSGQGVARA RATSVNDRSR FNNLDKLLST PSPVNRSHNS SPTNGLSQAN GTVRIPNATT 180
181 ENSKDKQNEF FKKGYTLANV KDDEEQEGIV SSSSADSLLS HGNEPPRYDE IVPLMSDEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
