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View Structure Prediction Details

Protein: gi|221322833
Organism: Bacillus subtilis subsp. subtilis str. SMY
Length: 193 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221322833.

Description E-value Query
Range
Subject
Range
gi|17230467, gi|... - gi|17230467|ref|NP_487015.1| hypothetical protein alr2975 [Nostoc sp. PCC 7120], gi|17132069|dbj|BAB...
gi|25327710 - pir||AH2177 hypothetical protein alr2975 [imported] - Nostoc sp. (strain PCC 7120)
186.0 [0..1] [192..1]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEEKNTNTE KTAKKKTNTY LEWGKAIVIA VLLALLIRHF LFEPYLVEGS SMYPTLHDGE  60
   61 RLFVNKTVNY IGELKRGDIV IINGETSKIH YVKRLIGKPG ETVQMKDDTL YINGKKVAEP 120
  121 YL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.522879
Match: 1t7dA
Description: Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [123-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKNKKEAEKL GVSLTGDFGP VKVPKGKYFV MGDNRLNSMD SRNGLGLIAE DRIVGTSKFV  60
   61 FFPFNEMRQT K

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.88
Match: 1t7dA
Description: Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor
Matching Structure (courtesy of the PDB):

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