YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|221317741
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 104 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221317741.

Description E-value Query
Range
Subject
Range
gi|52079146, gi|... - gi|52784513|ref|YP_090342.1| YerC [Bacillus licheniformis ATCC 14580], gi|52347015|gb|AAU39649.1| Ye...
144.0 [0..1] [103..1]

Back

Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIDKLRGKE LDQLFNSILS LKDLEECYRF FDDLCTINEI QSLAQRLEVA RMLREGNTYH  60
   61 KIETETGAST ATISRVKRCL NYGNDAYEMA LDRVKETETE SSSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.30103
Match: 1rcsA
Description: Trp repressor, TrpR
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle