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View Structure Prediction Details

Protein: gi|220944526, gi...
Organism: synthetic construct
Length: 205 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220944526, gi....

Description E-value Query
Range
Subject
Range
gi|125772586, gi... - gi|54637326|gb|EAL26728.1| GA12322 [Drosophila pseudoobscura pseudoobscura], gi|125772586|ref|XP_001...
gi|125772586|ref... - GA12322-PA [Drosophila pseudoobscura], GA12322 [Drosophila pseudoobscura pseudoobscura]
gi|195159116, gi... - gi|195159116|ref|XP_002020428.1| GL13517 [Drosophila persimilis], gi|194117197|gb|EDW39240.1| GL1351...
165.0 [0..19] [205..1]

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Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFFGFPQIS RHFSKFTKMS KSALVILAPG AEEMEFIIAA DVLRRAGIKV TVAGLNGGEA  60
   61 VKCSRDVQIL PDTSLAQVAS DKFDVVVLPG GLGGSNAMGE SSLVGDLLRS QESGGGLIAA 120
  121 ICAAPTVLAK HGVASGKSLT SYPSMKPQLV NNYSYVDDKT VVKDGNLITS RGPGTAYEFA 180
  181 LKIAEELAGK EKVQEVAKGL LVAYN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.0
Match: 1j42A
Description: Crystal Structure of Human DJ-1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.30391542469987 bayes_pls_golite062009
binding 1.22860407524238 bayes_pls_golite062009
ligase activity 1.03859358394018 bayes_pls_golite062009
peptidase activity 0.819143099666235 bayes_pls_golite062009
nucleic acid binding 0.3972868364469 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.217251599372912 bayes_pls_golite062009
hydrolase activity 0.121916378202276 bayes_pls_golite062009
protein binding 0.0152024556625711 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle