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View Structure Prediction Details

Protein: NUD14_ARATH
Organism: Arabidopsis thaliana
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUD14_ARATH.

Description E-value Query
Range
Subject
Range
gi|4586103, gi|7... - pir||T06605 hypothetical protein F16J13.50 - Arabidopsis thaliana, gi|7267899|emb|CAB78241.1| putati...
239.0 [0..1] [309..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFTLLPSR LLAFPSRALP RRLHHHHAKL ILRCKMSSSS SSLTQSITLP SQPNEPVLVS  60
   61 ATAGISSSDF RDAIDSSLFR NWLRNLESES GI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LADGSMTLKQ VLIQGVDMFG KRIGFLKFKA DIFDKETGQK VPGIVFARGP AVAVLILLES  60
   61 DGETYAVLTE QVRVPTGKIV LELPAGMLDD DKGDFVGTAV REVEEEIGIK LKKEDMVDLT 120
  121 AFLDPSTGYR IFPSPGGCDE EMSVFLYRGQ VEKETIRQLQ GKETGLREHG EFIKVRLIPY 180
  181 RELWRKTADA KVLMSIGLYE MAQREGLVSS QRLKPNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1g0sA
Description: ADP-ribose pyrophosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.960699420760702 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle