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View Structure Prediction Details

Protein: gi|221322004
Organism: Bacillus subtilis subsp. subtilis str. SMY
Length: 431 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221322004.

Description E-value Query
Range
Subject
Range
gi|52784496, gi|... - gi|52784496|ref|YP_090325.1| adenylosuccinate lyase [Bacillus licheniformis ATCC 14580], gi|52346998...
514.0 [0..1] [431..1]

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Predicted Domain #1
Region A:
Residues: [1-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIERYSRPEM SAIWTDENRF QAWLEVEILA CEAWAELGVI PKEDVKVMRE NASFDINRIL  60
   61 EIEKDTRHDV VAFTRAVSES LGEERKWVHY GLTSTDVVDT ALSYLLKQAN DILLKDLERF 120
  121 VDIIKEKAKE HKYTVMMGRT HGVHAEPTTF GLKLALWHEE MKRNLERFKQ AKAGIEVGKI 180
  181 SGAVGTYANI DPFVEQYVCE KLGLKAAPIS TQTLQRDRHA DYMATLALIA TSIEKFAVEI 240
  241 RGLQKSETRE VEEFFAKGQK GSSAMPHKRN PIGSENMTGM ARVIRGYMMT AYENVPLWHE 300
  301 RDISHSSAER IILPDATIAL NYMLNRFSNI VKNLTVFPEN MKRNMDRTLG LIYSQRVLLA 360
  361 LIDTGLTREE AYDTVQPKAM EAWEKQVPFR ELVEAEEKIT SRLSPEKIAD CFDYNYHLKN 420
  421 VDLIFERLGL A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 144.0
Match: 1f1oA
Description: Adenylosuccinate lyase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.51282259572665 bayes_pls_golite062009
amidine-lyase activity 2.40316208184674 bayes_pls_golite062009
N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity 2.14243568660036 bayes_pls_golite062009
lyase activity 1.34522462023923 bayes_pls_golite062009
binding 0.733777780290608 bayes_pls_golite062009
carbon-nitrogen lyase activity 0.542354254008207 bayes_pls_golite062009
fumarate hydratase activity 0.364320954362762 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle