Protein: | gi|190409093 |
Organism: | Saccharomyces cerevisiae RM11-1a |
Length: | 619 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190409093.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [57..610] | [1..515] |
|
0.0 | [1..619] | [1..619] |
|
0.0 | [57..604] | [1..510] |
|
0.0 | [57..611] | [1..516] |
|
0.0 | [57..611] | [1..516] |
|
0.0 | [57..604] | [1..510] |
|
0.0 | [57..604] | [1..510] |
|
0.0 | [4..599] | [33..614] |
|
0.0 | [57..602] | [1..508] |
|
0.0 | [57..609] | [1..514] |
Region A: Residues: [1-476] |
1 11 21 31 41 51 | | | | | | 1 MVKESIIALA EHAASRASRV IPPVKLAYKN MLKDPSSKYK PFNAPKLSNR KWPDNRITRA 60 61 PRWLSTDLRD GNQSLPDPMS VEQKKEYFHK LVNIGFKEIE VSFPSASQTD FDFTRYAVEN 120 121 APDDVSIQCL VQSREHLIKR TVEALTGAKK ATIHTYLATS DMFREIVFNM SREEAISKAV 180 181 EATKLVRKLT KDDPSQQATR WSYEFSPECF SDTPGEFAVE ICEAVKKAWE PTEENPIIFN 240 241 LPATVEVASP NVYADQIEYF ATHITEREKV CISTHCHNDR GCGVAATELG MLAGADRVEG 300 301 CLFGNGERTG NVDLVTVAMN MYTQGVSPNL DFSDLTSVLD VVERCNKIPV SQRAPYGGDL 360 361 VVCAFSGSHQ DAIKKGFNLQ NKKRAQGETQ WRIPYLPLDP KDIGRDYEAV IRVNSQSGKG 420 421 GAAWVILRSL GLDLPRNMQI EFSSAVQDHA DSLGRELKSD EISKLFKEAY NYNDEQ |
Detection Method: | |
Confidence: | 7.73 |
Match: | 1e1cA |
Description: | Methylmalonyl-CoA mutase alpha subunit, domain 1; Methylmalonyl-CoA mutase alpha subunit, C-terminal domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
2-isopropylmalate synthase activity | 3.07962096729216 | bayes_pls_golite062009 |
transferase activity, transferring aldehyde or ketonic groups | 2.96685031644778 | bayes_pls_golite062009 |
catalytic activity | 2.67031204377352 | bayes_pls_golite062009 |
lyase activity | 0.740424046054758 | bayes_pls_golite062009 |
porphobilinogen synthase activity | 0.658378297259497 | bayes_pls_golite062009 |
transaldolase activity | 0.184100272651834 | bayes_pls_golite062009 |
binding | 0.155633578635864 | bayes_pls_golite062009 |
Region A: Residues: [477-619] |
1 11 21 31 41 51 | | | | | | 1 YQAISLVNYN VEKFGTERRV FTGQVKVGDQ IVDIEGTGNG PISSLVDALS NLLNVRFAVA 60 61 NYTEHSLGSG SSTQAASYIH LSYRRNADNE KAYKWGVGVS EDVGDSSVRA IFATINNIIH 120 121 SGDVSIPSLA EVEGKNAAAS GSA |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.772 | 0.308 | leucine biosynthetic process | c.55.3 | Ribonuclease H-like |
View | Download | 0.754 | 0.100 | leucine biosynthetic process | d.109.1 | Actin depolymerizing proteins |
View | Download | 0.773 | N/A | N/A | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
View | Download | 0.746 | N/A | N/A | d.79.2 | Tubulin/Dihydroxyacetone kinase C-terminal domain |
View | Download | 0.636 | N/A | N/A | c.55.3 | Ribonuclease H-like |
View | Download | 0.591 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
View | Download | 0.535 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
View | Download | 0.526 | N/A | N/A | b.60.1 | Lipocalins |
View | Download | 0.513 | N/A | N/A | c.51.2 | TolB, N-terminal domain |
View | Download | 0.509 | N/A | N/A | d.189.1 | PX domain |
View | Download | 0.494 | N/A | N/A | c.55.3 | Ribonuclease H-like |
View | Download | 0.482 | N/A | N/A | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
View | Download | 0.480 | N/A | N/A | b.60.1 | Lipocalins |
View | Download | 0.478 | N/A | N/A | c.55.6 | DNA repair protein MutS, domain II |
View | Download | 0.465 | N/A | N/A | b.1.18 | E set domains |
View | Download | 0.463 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
View | Download | 0.462 | N/A | N/A | b.2.4 | Alpha-macroglobulin receptor domain |
View | Download | 0.453 | N/A | N/A | c.55.3 | Ribonuclease H-like |
View | Download | 0.449 | N/A | N/A | c.23.1 | CheY-like |
View | Download | 0.447 | N/A | N/A | b.1.4 | beta-Galactosidase/glucuronidase domain |
View | Download | 0.437 | N/A | N/A | d.58.21 | Molybdenum cofactor biosynthesis protein C, MoaC |
View | Download | 0.427 | N/A | N/A | d.155.1 | Pyruvoyl-dependent histidine and arginine decarboxylases |
View | Download | 0.426 | N/A | N/A | b.1.18 | E set domains |
View | Download | 0.420 | N/A | N/A | d.58.41 | SEA domain |
View | Download | 0.411 | N/A | N/A | c.57.1 | Molybdenum cofactor biosynthesis proteins |
View | Download | 0.395 | N/A | N/A | b.60.1 | Lipocalins |
View | Download | 0.392 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
View | Download | 0.392 | N/A | N/A | c.23.13 | Type II 3-dehydroquinate dehydratase |
View | Download | 0.370 | N/A | N/A | c.23.1 | CheY-like |
View | Download | 0.369 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
View | Download | 0.368 | N/A | N/A | b.22.1 | TNF-like |
View | Download | 0.357 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
View | Download | 0.355 | N/A | N/A | b.60.1 | Lipocalins |
View | Download | 0.349 | N/A | N/A | b.55.1 | PH domain-like |
View | Download | 0.345 | N/A | N/A | b.7.1 | C2 domain (Calcium/lipid-binding domain, CaLB) |
View | Download | 0.343 | N/A | N/A | c.32.1 | Tubulin/Dihydroxyacetone kinase nucleotide-binding domain |
View | Download | 0.339 | N/A | N/A | b.60.1 | Lipocalins |
View | Download | 0.324 | N/A | N/A | c.36.1 | Thiamin diphosphate-binding fold (THDP-binding) |
View | Download | 0.321 | N/A | N/A | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
View | Download | 0.320 | N/A | N/A | c.57.1 | Molybdenum cofactor biosynthesis proteins |
View | Download | 0.314 | N/A | N/A | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
View | Download | 0.309 | N/A | N/A | b.1.18 | E set domains |
View | Download | 0.303 | N/A | N/A | c.116.1 | alpha/beta knot |
View | Download | 0.298 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
View | Download | 0.298 | N/A | N/A | c.61.1 | PRTase-like |
View | Download | 0.297 | N/A | N/A | b.60.1 | Lipocalins |
View | Download | 0.295 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
View | Download | 0.295 | N/A | N/A | a.1.1 | Globin-like |
View | Download | 0.292 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
View | Download | 0.289 | N/A | N/A | c.55.5 | MTH1175-like |
View | Download | 0.289 | N/A | N/A | b.1.1 | Immunoglobulin |
View | Download | 0.289 | N/A | N/A | c.57.1 | Molybdenum cofactor biosynthesis proteins |
View | Download | 0.277 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
View | Download | 0.276 | N/A | N/A | c.56.1 | HybD-like |
View | Download | 0.274 | N/A | N/A | b.55.1 | PH domain-like |
View | Download | 0.265 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
View | Download | 0.261 | N/A | N/A | c.23.1 | CheY-like |
View | Download | 0.245 | N/A | N/A | d.110.3 | PYP-like sensor domain (PAS domain) |
View | Download | 0.245 | N/A | N/A | d.93.1 | SH2 domain |
View | Download | 0.244 | N/A | N/A | c.55.3 | Ribonuclease H-like |
View | Download | 0.234 | N/A | N/A | d.15.6 | Superantigen toxins, C-terminal domain |
View | Download | 0.232 | N/A | N/A | c.95.1 | Thiolase-like |
View | Download | 0.224 | N/A | N/A | c.8.4 | Transferrin receptor ectodomain, apical domain |
View | Download | 0.223 | N/A | N/A | b.1.10 | Clathrin adaptor appendage domain |
View | Download | 0.223 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
View | Download | 0.222 | N/A | N/A | d.58.16 | Poly(A) polymerase, C-terminal domain |
View | Download | 0.222 | N/A | N/A | c.51.3 | B12-dependend dehydatases associated subunit |
View | Download | 0.222 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
View | Download | 0.218 | N/A | N/A | d.58.9 | RuBisCO, large subunit, small (N-terminal) domain |
View | Download | 0.215 | N/A | N/A | b.12.1 | Lipase/lipooxygenase domain (PLAT/LH2 domain) |
View | Download | 0.212 | N/A | N/A | c.23.10 | SGHN hydrolase |
View | Download | 0.211 | N/A | N/A | c.10.1 | RNI-like |
View | Download | 0.211 | N/A | N/A | a.118.1 | ARM repeat |
View | Download | 0.209 | N/A | N/A | c.56.3 | Peptidyl-tRNA hydrolase |
View | Download | 0.209 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
View | Download | 0.206 | N/A | N/A | d.15.1 | Ubiquitin-like |