Protein: | gi|190406597 |
Organism: | Saccharomyces cerevisiae RM11-1a |
Length: | 451 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406597.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..451] | [1..451] |
|
4.0E-98 | [1..450] | [1..429] |
|
1.0E-80 | [3..368] | [1..340] |
|
9.0E-79 | [3..368] | [1..338] |
|
2.0E-73 | [3..212] | [268..485] |
Region A: Residues: [1-362] |
1 11 21 31 41 51 | | | | | | 1 MGINNPIPRS LKSETNFVKP NQVFGADQVI PPDVLKRAKG LAIITILKAG FLFSGRAGSG 60 61 VIVARLKDGT WSAPSAIAMA GAGAGGMVGI ELTDFVFILN TQDAVKSFSE FGTITLGGNV 120 121 SVSAGPLGRS AEAAASASAG GVAAVFAYSK SKGLFAGVSV EGSAIIERRE ANRKFYGDNC 180 181 TAKMILSGRI RPPPAVDPLF RVLESRAFNY RPSNGGRGSF DDDEDDYYDD DDYYNDIPSS 240 241 FSSTDASSTR PNTRSTRRRA QSGSRYTFDD DDDDDDYGTG YSRNSRLAPT NSGGSGGKLD 300 301 DPSGASSYYA SHRRSGTAQS RARSSRNRWA DDEYDDYDDD YESGYRRGNG RDRTKDREVD 360 361 DL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [363-451] |
1 11 21 31 41 51 | | | | | | 1 SNRFSKSRIS SASTPQTSQG RFTAPTSPST SSPKAVALYS FAGEESGDLP FRKGDVITIL 60 61 KKSDSQNDWW TGRVNGREGI FPANYVELV |
Detection Method: | |
Confidence: | 117.491979 |
Match: | 1semA_ |
Description: | Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
cytoskeletal protein binding | 2.99729194621598 | bayes_pls_golite062009 |
protein binding | 2.48473240495651 | bayes_pls_golite062009 |
actin binding | 2.2471575515877 | bayes_pls_golite062009 |
binding | 2.18950934715874 | bayes_pls_golite062009 |
actin filament binding | 1.11370928993107 | bayes_pls_golite062009 |
transporter activity | 0.164166239570489 | bayes_pls_golite062009 |