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View Structure Prediction Details

Protein: gi|209395606, gi...
Organism: Escherichia coli O157:H7 str. EC4115
Length: 52 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|209395606, gi....

Description E-value Query
Range
Subject
Range
gi|195936128 - gi|195936128|ref|ZP_03081510.1| hypothetical protein EscherichcoliO157_06636 [Escherichia coli O157:...
gi|209777642, gi... - pir||G85556 hypothetical protein Z0721 [imported] - Escherichia coli (strain O157:H7, substrain EDL...
gi|15800295, gi|... - gi|15800295|ref|NP_286307.1| hypothetical protein Z0721 [Escherichia coli O157:H7 EDL933], gi|125134...
gi|254591147, gi... - gi|254791747|ref|YP_003076584.1| hypothetical protein ECSP_0634 [Escherichia coli O157:H7 str. TW143...
77.0 [0..1] [52..47]
gi|9507608, gi|5... - gi|9507608|ref|NP_052939.1| small toxic polypeptide [Plasmid R100], gi|5103207|dbj|BAA78843.1| post-...
gi|58383263, gi|... - gi|58383263|ref|YP_194833.1| small toxic polypeptide [Salmonella typhimurium], gi|37962742|gb|AAR056...
gi|170522121, gi... - gi|170650845|ref|YP_001739938.1| stable plasmid inheritance protein Hok [Escherichia coli SMS-3-5], ...
HOK_ECOLX - Protein hok OS=Escherichia coli GN=hok PE=3 SV=1
gi|37962742|gb|A... - post-segregation killing protein [Salmonella typhimurium], post-segregation killing protein [Salmone...
gi|118197020 - gi|118197020|emb|CAL69696.1| killer protein [Escherichia coli]
77.0 [0..1] [52..1]
gi|38259540, gi|... - gi|38348063|ref|NP_941312.1| small toxic polypeptide [Serratia marcescens], gi|38259540|emb|CAE51768...
gi|226426016, gi... - gi|226810103|ref|YP_002791798.1| hypothetical protein pEC-IMPQ_230 [Enterobacter cloacae], gi|226807...
74.0 [0..1] [52..1]
gi|160431875, gi... - gi|160431875|ref|YP_001551989.1| small toxic polypeptide [Salmonella enterica subsp. enterica serova...
gi|145849097 - gi|145849097|emb|CAM91663.1| putative stable plasmid inheritance protein [Salmonella enterica]
gi|16505979, gi|... - gi|18466663|ref|NP_569471.1| small toxic polypeptide [Salmonella enterica subsp. enterica serovar Ty...
73.0 [0..1] [52..1]
gi|10955445, gi|... - gi|9971639|dbj|BAB12590.1| yaeB [Escherichia coli], gi|10955445|ref|NP_065297.1| post-segregation ki...
73.0 [0..1] [50..1]
gi|10957290, gi|... - gi|7800343|gb|AAF69939.1|AF250878_100 plasmid maintenance protein [Salmonella typhi], gi|10957290|re...
gi|7800343|gb|AA... - plasmid maintenance protein [Salmonella typhi], plasmid maintenance protein [Salmonella typhi]
73.0 [0..1] [52..20]

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Predicted Domain #1
Region A:
Residues: [1-52]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLPRSSLVW CVLIVCLTLL IFTYLTRKSL CEIRYRDGYR EVAAFMAYES GK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.415 d.230.3 Amyloid beta a4 protein copper binding domain (domain 2)
View Download 0.339 d.230.4 Description not found.
View Download 0.318 b.122.1 PUA domain-like
View Download 0.275 d.37.1 CBS-domain
View Download 0.267 d.71.1 Cell division protein MinE topological specificity domain
View Download 0.267 d.71.1 Cell division protein MinE topological specificity domain
View Download 0.263 d.306.1 Description not found.
View Download 0.247 d.80.1 Tautomerase/MIF
View Download 0.236 d.230.3 Amyloid beta a4 protein copper binding domain (domain 2)
View Download 0.235 d.71.1 Cell division protein MinE topological specificity domain
View Download 0.235 d.71.1 Cell division protein MinE topological specificity domain
View Download 0.221 d.71.1 Cell division protein MinE topological specificity domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle