YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221324007
Organism:	Bacillus subtilis subsp. subtilis str. SMY
Length:	189 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221324007.

Description	E-value	Query Range	Subject Range
gi\|25290264 - pir\|\|F83816 late competence operon required for DNA binding and uptake comEB [imported] - Bacillus h... gi\|15613897, gi\|... - gi\|15613897\|ref\|NP_242200.1\| late competence operon required for DNA binding and uptake [Bacillus ha...	185.0	[0..1]	[187..1]

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Predicted Domain #1

Region A:
Residues: [1-189]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERISWNQYF MAQSHLLALR STCPRLSVGA TIVRDKRMIA GGYNGSIAGG VHCADEGCLM  60
   61 IDDHCARTIH AEMNAILQCS KFGVPTDGAE IYVTHYPCIQ CCKSIIQAGI KTVYYAEDYK 120
  121 THPYAQELFE QAGVTVEQVE LDEMIVDLKN REKLSFVAGL IGKLADAGLA EEELKKIHEQ 180
  181 ANTLFTSYV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.39794
Match:	2hvvA
Description:	No description for 2hvvA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits