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View Structure Prediction Details

Protein: gi|221312163
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 275 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221312163.

Description E-value Query
Range
Subject
Range
gi|89084110, gi|... - gi|89101175|ref|ZP_01174007.1| signal peptidase-like protein [Bacillus sp. NRRL B-14911], gi|8908411...
413.0 [0..1] [275..1]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNVIGVRFK KAGKIYYFDP NGFHIEHDSC VIVETVRGVE YGQVVIANKQ VDEHDVVLPL  60
   61 RKVIRVADDR DLLIVEENKQ EALSAFDICQ KKVIEHGLDM KLVDVEFTFD RNKVIFYFTA 120
  121 DGRVDFRELV KDLASIFKTR IELRQIGVRD EAKMLGGI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 57.49485
Match: PF04468.3
Description: No description for PF04468.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPCGRMLCCS TFLGDFEPVS IKMAKDQNLS LNPTKISGLC GRLMCCLKYE NDEYETAKEQ  60
   61 LPDIGEMITT ANGPAKVVGL NILERVLQVE LINREKVIEY TWEELLEEGV VSAQTTD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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