YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|190406751
Organism:	Saccharomyces cerevisiae RM11-1a
Length:	146 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406751.

Description	E-value	Query Range	Subject Range
YHR162W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... gi\|151944108 - gi\|151944108\|gb\|EDN62401.1\| conserved protein [Saccharomyces cerevisiae YJM789] MPC2_YEAST - Mitochondrial pyruvate carrier 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC2 PE...	191.0	[0..1]	[117..1]
gi\|7504062 - gi\|7504062\|pir\|\|T25797 hypothetical protein F53F10.3 - Caenorhabditis elegans	171.0	[0..4]	[112..21]
gi\|50302615, gi\|... - gi\|50302615\|ref\|XP_451243.1\| unnamed protein product [Kluyveromyces lactis], gi\|49640374\|emb\|CAH0283... gi\|49640374 - gi\|49640374\|emb\|CAH02831.1\| KLLA0A05500p [Kluyveromyces lactis]	171.0	[0..1]	[132..1]
gi\|44983293 - gi\|44983293\|gb\|AAS52475.1\| AEL210Cp [Ashbya gossypii ATCC 10895] gi\|45190397, gi\|... - gi\|45190397\|ref\|NP_984651.1\| AEL210Cp [Ashbya gossypii ATCC 10895], gi\|44983293\|gb\|AAS52475.1\| AEL21...	169.0	[0..1]	[125..1]
gi\|125777326, gi... - gi\|54639317\|gb\|EAL28719.1\| GA14151-PA [Drosophila pseudoobscura], gi\|125777326\|ref\|XP_001359570.1\| G...	166.0	[0..9]	[104..39]
gi\|49525627 - gi\|49525627\|emb\|CAG59244.1\| unnamed protein product [Candida glabrata] gi\|49525627, gi\|... - gi\|50287781\|ref\|XP_446320.1\| unnamed protein product [Candida glabrata], gi\|49525627\|emb\|CAG59244.1\|...	165.0	[0..4]	[125..2]
gi\|7488128, gi\|7... - pir\|\|F71409 probable light induced protein - Arabidopsis thaliana, gi\|7268175\|emb\|CAB78511.1\| light ...	163.0	[0..9]	[106..214]

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Predicted Domain #1

Region A:
Residues: [1-146]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASAFNFAF RRFWNSETGP KTVHFWAPTL KWGLVFAGLN DIKRPVEKVS GAQNLSLLAT  60
   61 ALIWTRWSFV IKPKNYLLAS VNFFLGCTAG YHLTRIANFR IRNGDSFKQV IHYIIKGETP 120
  121 AAVAAKQTAS TSMNKGVIGT NPPITH

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	84.744727
Match:	PF03650.4
Description:	No description for PF03650.4 was found.

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits