| Protein: | gi|218201334 |
| Organism: | Oryza sativa Indica Group |
| Length: | 509 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218201334.
| Description | E-value | Query Range |
Subject Range |
|
|
520.0 | [0..1] | [509..1] |
|
Region A: Residues: [1-282] |
1 11 21 31 41 51
| | | | | |
1 MEGNARGGGH SEALKNYNLG RTLGIGSFGK VKIAEHKLTG HRVAIKILNR RQMRNMEMEE 60
61 KAKREIKILR LFIHPHIIRL YEVIYTPTDI YVVMEYCKFG ELFDYIVEKG RLQEDEARRI 120
121 FQQIISGVEY CHRNMVVHRD LKPENLLLDS KYNVKLADFG LSNVMHDGHF LKTSCGSPNY 180
181 AAPEVISGKL YAGPEVDVWS CGVILYALLC GTLPFDDENI PNLFKKIKGG IYTLPSHLSA 240
241 LARDLIPRML VVDPMKRITI REIREHQWFQ IRLPRYLAVP PP
|
| Detection Method: |  |
| Confidence: | 80.522879 |
| Match: | 2fh9A |
| Description: | No description for 2fh9A was found. |
|
Region A: Residues: [283-359] |
1 11 21 31 41 51
| | | | | |
1 DTAQQAKMID EDTLQDVVNL GYEKDHVCES LRNRLQNEAT VAYYLLLDNR FRATSGYLGA 60
61 DYQESLERNL NRFASSE
|
| Detection Method: | |
| Confidence: | 1.1 |
| Match: | 2cpwA |
| Description: | Solution structure of RSGI RUH-031, a UBA domain from human cDNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.36949910682766 | bayes_pls_golite062009 |
| binding | 2.36429435103114 | bayes_pls_golite062009 |
| DNA binding | 2.0124319122573 | bayes_pls_golite062009 |
| nucleic acid binding | 1.91576114591492 | bayes_pls_golite062009 |
| protein binding | 1.01573863836689 | bayes_pls_golite062009 |
| enzyme binding | 0.973545763884891 | bayes_pls_golite062009 |
| small conjugating protein binding | 0.678408535705177 | bayes_pls_golite062009 |
| ubiquitin binding | 0.319972124839967 | bayes_pls_golite062009 |
| catalytic activity | 0.2736776367506 | bayes_pls_golite062009 |
| transcription factor binding | 0.00604949932390486 | bayes_pls_golite062009 |
|
Region A: Residues: [360-509] |
1 11 21 31 41 51
| | | | | |
1 SASSNTRHYL PGSSDPHASG LRPHYPVERK WALGLQSRAQ PREIMIEVLK ALEDLNVCWK 60
61 KNGQYNMKCR WSVGYPQATD MLDVNHSFVD DSIIMDNGDV NGRLPAVIKF EIQLYKSRDE 120
121 KYLLDMQRVT GPQLLFLDFC AAFLTKLRVL
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 2qlvA |
| Description: | No description for 2qlvA was found. |
