| Protein: | gi|224502275 |
| Organism: | Listeria monocytogenes FSL R2-561 |
| Length: | 800 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|224502275.
| Description | E-value | Query Range |
Subject Range |
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482.0 | [0..1] | [800..1] |
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480.0 | [0..1] | [800..1] |
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472.0 | [0..1] | [800..1] |
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470.0 | [0..1] | [800..1] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MRKKRYVWLK SILVAILVFG SGVWINTSNG TNAQAATITQ DTPINQIFTD TALAEKMKTV 60
61 LGKTNVTDTV SQTDLDQVTT LQADRLGIKS IDGVE
|
| Detection Method: |  |
| Confidence: | 60.09691 |
| Match: | 1o6sA |
| Description: | Internalin A |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [96-213] |
1 11 21 31 41 51
| | | | | |
1 YLNNLTQINF SNNQLTDITP LKNLTKLVDI LMNNNQIADI TPLANLTNLT GLTLFNNQIT 60
61 DIDPLKNLTN LNRLELSSNT ISDISALSGL TSLQQLSFGN QVTDLKPLAN LTTLERLD
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 1wwlA |
| Description: | Crystal structure of CD14 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [214-705] |
1 11 21 31 41 51
| | | | | |
1 ISSNKVSDIS VLAKLTNLES LIATNNQISD ITPLGILTNL DELSLNGNQL KDIGTLASLT 60
61 NLTDLDLANN QISNLAPLSG LTKLTELKLG ANQISNISPL AGLTALTNLE LNENQLEDIS 120
121 PISNLKNLTY LTLYFNNISD ISPVSSLTKL QRLFFYNNKV SDVSSLANLT NINWLSAGHN 180
181 QISDLTPLAN LTRITQLGLN DQAWTNAPVN YKANVSIPNT VKNVTGALIA PATISDGGSY 240
241 TEPDITWNLP SYTNEVSYTF SQPVTIGKGT TTFSGTVTQP LKAIFNVKFH VDGKETTKEV 300
301 EAGNLLTEPA KPVKEGHTFV GWFDAQTGGT KWNFSTDKMP TNDINLYAQF SINSYTATFD 360
361 NDGVTTSQTV DYQGLLQEPT APTKEGYTFK GWYDAKTGGD KWDFATSKMP AKNITLYAQY 420
421 SANSYTATFD VDGKSTTQAV DYQGLLKEPK APTKAGYTFK GWYDEKTDGK KWDFATDKMP 480
481 ANDITLYAQF TK
|
| Detection Method: | |
| Confidence: | 58.39794 |
| Match: | 1m9sA |
| Description: | Internalin B; Internalin B, C-terminal domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [706-800] |
1 11 21 31 41 51
| | | | | |
1 NPVAPPTTGG NTPPTTNNGG NTTPPSANIP GSDTSNTSTG NSASTTSTMN AYDPYNSKEA 60
61 SLPTTGDSDN ALYLLLGLLA VGTAMALTKK ARASK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
